RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 CSF2P04141 144 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 ALDOCP09972 364 aaKnown RBP13.8□□□□□ -0.2
CNN2-204ENST00000562075 PRR35P0CG20 571 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 CDH1P12830 882 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 NME1P15531 152 aaKnown RBP13.8□□□□□ -0.2
CNN2-204ENST00000562075 PRDX6P30041 224 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 SHMT2P34897 504 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 SLC19A1P41440 591 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 DHPSP49366 369 aaPredicted RBP13.8□□□□□ -0.2
CNN2-204ENST00000562075 CSNK1EP49674 416 aaKnown RBP13.8□□□□□ -0.2
CNN2-204ENST00000562075 RASSF2P50749 326 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 ERVK-8P63133 956 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 C1orf61Q13536 156 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 LAPTM5Q13571 262 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 SLBPQ14493 270 aaKnown RBP eCLIP13.8□□□□□ -0.2
CNN2-204ENST00000562075 NAA25Q14CX7 972 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 ELOCQ15369 112 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 HIST2H2ACQ16777 129 aaPredicted RBP13.8□□□□□ -0.2
CNN2-204ENST00000562075 KIF19Q2TAC6 998 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 PAGE2BQ5JRK9 111 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 CATSPEREQ5SY80 951 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 LYSMD4Q5XG99 296 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 ATG9BQ674R7 924 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 HIST2H2AA3Q6FI13 130 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 MED27Q6P2C8 311 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 IYDQ6PHW0 289 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 NXPE4Q6UWF7 544 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 Q6ZSR9 355 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 TRIM46Q7Z4K8 759 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 LINC01555Q8NAE3 123 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 FNDC5Q8NAU1 212 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 HMGCLL1Q8TB92 370 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 GAB3Q8WWW8 586 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 LCN9Q8WX39 176 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 REPS1Q96D71 796 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 CMTM5Q96DZ9 223 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 WDR34Q96EX3 536 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 ACAT2Q9BWD1 397 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 EHD1Q9H4M9 534 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 PCDHGA11Q9Y5H2 935 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
CNN2-204ENST00000562075 TRIOO75962 3097 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 KIR2DS5A0A0G2JLQ3 304 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 A0A0G2JNG1 304 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 A0A1W2PPV9 198 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 H0YIV9 168 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 KIR2DS3K7RE56 304 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 PSMD12O00232 456 aaPredicted RBP13.79□□□□□ -0.2
CNN2-204ENST00000562075 LSM1O15116 133 aaKnown RBP13.79□□□□□ -0.2
CNN2-204ENST00000562075 VIPP01282 170 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 PCNAP12004 261 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 COX4I1P13073 169 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 IDO1P14902 403 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 EZRP15311 586 aaKnown RBP13.79□□□□□ -0.2
CNN2-204ENST00000562075 PSMB5P28074 263 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 CPA2P48052 419 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 AFF3P51826 1226 aaKnown RBP13.79□□□□□ -0.2
CNN2-204ENST00000562075 NEK2P51955 445 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
CNN2-204ENST00000562075 HMGCS1Q01581 520 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 ZNF33BQ06732 778 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 E2F2Q14209 437 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 KIR2DS5Q14953 304 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 PLCL1Q15111 1095 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 RPS6KA2Q15349 733 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 TEAD4Q15561 434 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 GSTA3Q16772 222 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 AP5B1Q2VPB7 878 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 C6orf136Q5SQH8 315 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 GKN2Q86XP6 184 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 POU5F2Q8N7G0 328 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 DTWD2Q8NBA8 298 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 LMX1AQ8TE12 382 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 JPH3Q8WXH2 748 aaPredicted RBP13.79□□□□□ -0.2
CNN2-204ENST00000562075 ACPTQ9BZG2 426 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 PELI2Q9HAT8 420 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 LRTM1Q9HBL6 345 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 POT1Q9NUX5 634 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 SPASTQ9UBP0 616 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 CCL27Q9Y4X3 112 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 PCDHB11Q9Y5F2 797 aa13.79□□□□□ -0.2
CNN2-204ENST00000562075 TECTAO75443 2155 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 SERTM1A2A2V5 107 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 PIPSLA2A3N6 862 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 XRCC1P18887 633 aaPredicted RBP13.78□□□□□ -0.2
CNN2-204ENST00000562075 MNAT1P51948 309 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 ACTN3Q08043 901 aaPredicted RBP13.78□□□□□ -0.2
CNN2-204ENST00000562075 CSTF3Q12996 717 aaKnown RBP13.78□□□□□ -0.2
CNN2-204ENST00000562075 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
CNN2-204ENST00000562075 MAD2L1Q13257 205 aaPredicted RBP13.78□□□□□ -0.2
CNN2-204ENST00000562075 DDX39BQ13838 428 aaKnown RBP13.78□□□□□ -0.2
CNN2-204ENST00000562075 HERC3Q15034 1050 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 SMU1Q2TAY7 513 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 PMS2CLQ68D20 193 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 AMIGO1Q86WK6 493 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 SNX32Q86XE0 403 aa13.78□□□□□ -0.2
CNN2-204ENST00000562075 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
CNN2-204ENST00000562075 MAML2Q8IZL2 1156 aaPredicted RBP13.78□□□□□ -0.2
CNN2-204ENST00000562075 KRT78Q8N1N4 520 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms