RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SEL1L3Q68CR1 1132 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 SLC47A2Q86VL8 602 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 TEX19Q8NA77 164 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 THAP8Q8NA92 274 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 SYN2Q92777 582 aaPredicted RBP2.8□□□□□ -1.96
SNX6-204ENST00000555541 ZNF622Q969S3 477 aaKnown RBP eCLIP2.8□□□□□ -1.96
SNX6-204ENST00000555541 SPACA9Q96E40 222 aaPredicted RBP2.8□□□□□ -1.96
SNX6-204ENST00000555541 C4orf45Q96LM5 186 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 SFXN2Q96NB2 322 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 LPAR4Q99677 370 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 TEX12Q9BXU0 123 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 MTMR12Q9C0I1 747 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 CHST11Q9NPF2 352 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 SLC35C2Q9NQQ7 365 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 STK26Q9P289 416 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 FBXO2Q9UK22 296 aaPredicted RBP2.8□□□□□ -1.96
SNX6-204ENST00000555541 ABT1Q9ULW3 272 aaKnown RBP2.8□□□□□ -1.96
SNX6-204ENST00000555541 PADI2Q9Y2J8 665 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 TMED3Q9Y3Q3 217 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 WIPI2Q9Y4P8 454 aa2.8□□□□□ -1.96
SNX6-204ENST00000555541 ARID4BQ4LE39 1312 aaPredicted RBP2.79□□□□□ -1.96
SNX6-204ENST00000555541 NEMP2A6NFY4 417 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 ACOD1A6NK06 481 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 SHISA7A6NL88 538 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 FPGTO14772 594 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 ARPC2O15144 300 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 TEX28O15482 410 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 ENTPD3O75355 529 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 GJB3O75712 270 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 CEACAM4O75871 244 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 KRT33AO76009 404 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 THEGLP0DJG4 465 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 CSH1P0DML2 217 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 CSH2P0DML3 217 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 FOLR2P14207 255 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 MPZP25189 248 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 KLC1Q07866 573 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 EXT1Q16394 746 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 NOTUMQ6P988 496 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 NUP54Q7Z3B4 507 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 LINC00346Q8IVM7 164 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 ABHD12Q8N2K0 398 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 METTL4Q8N3J2 472 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 MINDY1Q8N5J2 469 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.79□□□□□ -1.96
SNX6-204ENST00000555541 SLC37A3Q8NCC5 494 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 ATP8B4Q8TF62 1192 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 THOC1Q96FV9 657 aaKnown RBP2.79□□□□□ -1.96
SNX6-204ENST00000555541 OVOL2Q9BRP0 275 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 PANK2Q9BZ23 570 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 PUS3Q9BZE2 481 aaKnown RBP2.79□□□□□ -1.96
SNX6-204ENST00000555541 HOXD1Q9GZZ0 328 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 GHITMQ9H3K2 345 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 ZHX3Q9H4I2 956 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 TLE6Q9H808 572 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 CRNNQ9UBG3 495 aaPredicted RBP2.79□□□□□ -1.96
SNX6-204ENST00000555541 PRO0461Q9UI25 63 aa2.79□□□□□ -1.96
SNX6-204ENST00000555541 A0A087WUV0 522 aaPredicted RBP2.78□□□□□ -1.96
SNX6-204ENST00000555541 FSD2A1L4K1 749 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 SNURFLB1AK76 121 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 TSPAN9O75954 239 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 RPL35AP18077 110 aaKnown RBP2.78□□□□□ -1.96
SNX6-204ENST00000555541 SAT1P21673 171 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 IL4RP24394 825 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 PTGER4P35408 488 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 MATR3P43243 847 aaKnown RBP eCLIP2.78□□□□□ -1.96
SNX6-204ENST00000555541 ALDH3A2P51648 485 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 PSMC6P62333 389 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 IRX4P78413 519 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 EPS8Q12929 822 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 HSPB3Q12988 150 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 CHAF1BQ13112 559 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 CDH18Q13634 790 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 BAATQ14032 418 aaPredicted RBP2.78□□□□□ -1.96
SNX6-204ENST00000555541 TAB1Q15750 504 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 NTRK2Q16620 822 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 C15orf32Q32M92 178 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 CBWD6Q4V339 395 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 HIGD2BQ4VC39 106 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 CBWD3Q5JTY5 395 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 GDPGP1Q6ZNW5 385 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 C4orf50Q6ZRC1 276 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 LGI2Q8N0V4 545 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 CHPT1Q8WUD6 406 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 SLC22A18Q96BI1 424 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 NSUN4Q96CB9 384 aaKnown RBP2.78□□□□□ -1.96
SNX6-204ENST00000555541 ATXN7L3BQ96GX2 97 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 SEPHS2Q99611 448 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 MRPL1Q9BYD6 325 aaKnown RBP2.78□□□□□ -1.96
SNX6-204ENST00000555541 B3GAT2Q9NPZ5 323 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.78□□□□□ -1.96
SNX6-204ENST00000555541 GIMAP4Q9NUV9 329 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 HAUS2Q9NVX0 235 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 CTSZQ9UBR2 303 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 ZNF510Q9Y2H8 683 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 R4GN57 208 aa2.78□□□□□ -1.96
SNX6-204ENST00000555541 A0A1W2PPQ1 181 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 A8MXK9 166 aa2.77□□□□□ -1.97
SNX6-204ENST00000555541 TFECO14948 347 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms