RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 MMP24Q9Y5R2 645 aa5.7□□□□□ -1.5
PCNX1-205ENST00000553508 PHLPP1O60346 1717 aa5.7□□□□□ -1.5
PCNX1-205ENST00000553508 TMEM131LA2VDJ0 1609 aa5.7□□□□□ -1.5
PCNX1-205ENST00000553508 IQGAP3Q86VI3 1631 aa5.7□□□□□ -1.5
PCNX1-205ENST00000553508 TRPM2O94759 1503 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 LMOD3Q0VAK6 560 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 E2F5Q15329 346 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 SNAPC1Q16533 368 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 SLC25A53Q5H9E4 307 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 C20orf194Q5TEA3 1177 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 MZT2BQ6NZ67 158 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 HOGA1Q86XE5 327 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 KIRREL3Q8IZU9 778 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 SSMEM1Q8WWF3 244 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 ARHGAP45Q92619 1136 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 SPACA9Q96E40 222 aaPredicted RBP5.69□□□□□ -1.5
PCNX1-205ENST00000553508 CABLES2Q9BTV7 478 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 Q9N2K0 584 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.69□□□□□ -1.5
PCNX1-205ENST00000553508 TNNQ9UQP3 1299 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 WDR37Q9Y2I8 494 aa5.69□□□□□ -1.5
PCNX1-205ENST00000553508 CHD2O14647 1828 aaKnown RBP5.69□□□□□ -1.5
PCNX1-205ENST00000553508 NUP155O75694 1391 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 DCCP43146 1447 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 MSGN1A6NI15 193 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 TOMM70O94826 608 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 IGHV4-31P0DP07 118 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 CDH3P22223 829 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 HERV-K104P61576 105 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 MAPRE1Q15691 268 aaKnown RBP5.68□□□□□ -1.5
PCNX1-205ENST00000553508 ODF4Q2M2E3 257 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 ARHGAP22Q7Z5H3 698 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 ZNF440Q8IYI8 595 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 LSMEM2Q8N112 164 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 SYN2Q92777 582 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-205ENST00000553508 SFXN2Q96NB2 322 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 RAD9AQ99638 391 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 TRIM51Q9BSJ1 452 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 MIS12Q9H081 205 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 GKN1Q9NS71 199 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 ASIC3Q9UHC3 531 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 RPS6KA6Q9UK32 745 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 PADI2Q9Y2J8 665 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 NME7Q9Y5B8 376 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 ANGPTL3Q9Y5C1 460 aa5.68□□□□□ -1.5
PCNX1-205ENST00000553508 TDRD15B5MCY1 1934 aaKnown RBP5.68□□□□□ -1.5
PCNX1-205ENST00000553508 E9PCH4 1651 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 TMEM221A6NGB7 291 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 ENO4A6NNW6 628 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 KHDRBS3O75525 346 aaKnown RBP5.67□□□□□ -1.5
PCNX1-205ENST00000553508 DDHD2O94830 711 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 GCNT1Q02742 428 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 TAF10Q12962 218 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 SLC1A5Q15758 541 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 DNAAF5Q86Y56 855 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 MARVELD2Q8N4S9 558 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 SLAMF9Q96A28 289 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 ABHD1Q96SE0 405 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 DGCR6LQ9BY27 220 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 UBXN6Q9BZV1 441 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 KLHL4Q9C0H6 718 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 OR2B2Q9GZK3 357 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 WNT5BQ9H1J7 359 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 CCDC68Q9H2F9 335 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 CPVLQ9H3G5 476 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 STK26Q9P289 416 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 PPIEQ9UNP9 301 aaKnown RBP5.67□□□□□ -1.5
PCNX1-205ENST00000553508 MYO5BQ9ULV0 1848 aa5.67□□□□□ -1.5
PCNX1-205ENST00000553508 COL16A1Q07092 1604 aaPredicted RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 AHDC1Q5TGY3 1603 aaPredicted RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 E9PQ18 207 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 DCXO43602 365 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 AHCYL1O43865 530 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 SP100P23497 879 aaPredicted RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 MAZP56270 477 aaKnown RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 HERC3Q15034 1050 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 KRT71Q3SY84 523 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 SYT14P1Q58G82 188 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 C6orf163Q5TEZ5 329 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 OR5AP2Q8NGF4 316 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 OR52N5Q8NH56 324 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 CFAP61Q8NHU2 1237 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 AZIN2Q96A70 460 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 DHX58Q96C10 678 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 THOC1Q96FV9 657 aaKnown RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 AGAP3Q96P47 875 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 GCNAQ96QF7 691 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 MAF1Q9H063 256 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 SHARPINQ9H0F6 387 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 SPHK1Q9NYA1 384 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 CPSF2Q9P2I0 782 aaKnown RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 CHORDC1Q9UHD1 332 aaPredicted RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 FBXO2Q9UK22 296 aaPredicted RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 GRID1Q9ULK0 1009 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 TMED3Q9Y3Q3 217 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 SHPRHQ149N8 1683 aa5.66□□□□□ -1.5
PCNX1-205ENST00000553508 TP53BP1Q12888 1972 aaPredicted RBP5.66□□□□□ -1.5
PCNX1-205ENST00000553508 ADAMTS13Q76LX8 1427 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 SPHKAPQ2M3C7 1700 aa5.65□□□□□ -1.5
PCNX1-205ENST00000553508 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms