RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PCDHGA10Q9Y5H3 936 aa14.27□□□□□ -0.13
HOXC11-202ENST00000546378 NOX1Q9Y5S8 564 aa14.27□□□□□ -0.13
HOXC11-202ENST00000546378 MIA3Q5JRA6 1907 aa14.27□□□□□ -0.13
HOXC11-202ENST00000546378 CKAP5Q14008 2032 aa14.27□□□□□ -0.13
HOXC11-202ENST00000546378 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 J3KTA2 159 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 GUCY1B2O75343 617 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 INHBBP09529 407 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 BCKDHAP12694 445 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ENGP17813 658 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 MSH3P20585 1137 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 TACR2P21452 398 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 RRM2P31350 389 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 DAPP51397 102 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ISL1P61371 349 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 PHC1P78364 1004 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ZNF177Q13360 481 aaPredicted RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 XKR4Q5GH76 650 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ARMC4Q5T2S8 1044 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 GPR65Q8IYL9 337 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 USE1Q9NZ43 259 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 DUSP12Q9UNI6 340 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 LCHNA4D1U4 455 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 H0YJX3 145 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 MEN1O00255 615 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 RGS14O43566 566 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 RHOQP17081 205 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 HTR1EP28566 365 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 SLC6A4P31645 630 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 NFKB2Q00653 900 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 MEF2AQ02078 507 aaPredicted RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 OXA1LQ15070 435 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 SETMARQ53H47 684 aaPredicted RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ZMAT1Q5H9K5 638 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 BRMS1LQ5PSV4 323 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 NKAPQ8N5F7 415 aaKnown RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 OR9Q2Q8NGE9 314 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 BPIFB1Q8TDL5 484 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 LINC01599Q8WXQ3 324 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 DNASE1L2Q92874 299 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 SLC35B4Q969S0 331 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 APIPQ96GX9 242 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 HSH2DQ96JZ2 352 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 NEDD4LQ96PU5 975 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 DEPDC7Q96QD5 511 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 WDR12Q9GZL7 423 aaKnown RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 CRISPLD1Q9H336 500 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ELOVL2Q9NXB9 296 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 SPASTQ9UBP0 616 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 MAP4K5Q9Y4K4 846 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 URB1O60287 2271 aaKnown RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 SCN10AQ9Y5Y9 1956 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 OR7A17O14581 309 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ZNF623O75123 536 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 UGT2B11O75310 529 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 PEX11BO96011 259 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 EPB42P16452 691 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 RAB41Q5JT25 222 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 SNAP47Q5SQN1 464 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 LAIR2Q6ISS4 152 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ACBD6Q9BR61 282 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 NEK6Q9HC98 313 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 AASDHPPTQ9NRN7 309 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 TMEM161AQ9NX61 479 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 KLHL20Q9Y2M5 609 aa14.26□□□□□ -0.13
HOXC11-202ENST00000546378 ARIH1Q9Y4X5 557 aaPredicted RBP14.26□□□□□ -0.13
HOXC11-202ENST00000546378 CCDC88CQ9P219 2028 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 H3BN98 237 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 FPGTO14772 594 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 PDYNP01213 254 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 APOA1P02647 267 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 SLC19A1P41440 591 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 CLK3P49761 638 aaKnown RBP14.25□□□□□ -0.13
HOXC11-202ENST00000546378 SERINC3Q13530 473 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 SPANXN2Q5MJ10 180 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 GTF2IRD2BQ6EKJ0 949 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 AFTPHQ6ULP2 937 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 OLIG3Q7RTU3 272 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 TSPAN33Q86UF1 283 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 GTF2IRD2Q86UP8 949 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 MON1AQ86VX9 555 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 HDAC2Q92769 488 aaKnown RBP14.25□□□□□ -0.13
HOXC11-202ENST00000546378 KAT8Q9H7Z6 458 aaKnown RBP14.25□□□□□ -0.13
HOXC11-202ENST00000546378 RLIMQ9NVW2 624 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 C1orf109Q9NX04 203 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 SIRT5Q9NXA8 310 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 CLEC4AQ9UMR7 237 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 NEU3Q9UQ49 428 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 A0A1B0GVC2 190 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 A6NIN4 97 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 TUFMP49411 452 aaKnown RBP14.25□□□□□ -0.13
HOXC11-202ENST00000546378 RPS26P62854 115 aaKnown RBP14.25□□□□□ -0.13
HOXC11-202ENST00000546378 SPIBQ01892 262 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 NFE2L1Q14494 772 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 DSC3Q14574 896 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 HKDC1Q2TB90 917 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 OTOP2Q7RTS6 562 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 TAGAPQ8N103 731 aa14.25□□□□□ -0.13
HOXC11-202ENST00000546378 CELF5Q8N6W0 485 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms