RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ATG9BQ674R7 924 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 ZNF627Q7L945 461 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 OTOP3Q7RTS5 596 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 UBE2J2Q8N2K1 259 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 CCDC54Q8NEL0 328 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 OR2AJ1Q8NGZ0 328 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 SLC22A17Q8WUG5 538 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 ELAC1Q9H777 363 aaKnown RBP6.77□□□□□ -1.33
SORT1-209ENST00000538502 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.77□□□□□ -1.33
SORT1-209ENST00000538502 NPAP1Q9NZP6 1156 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 TNS2Q63HR2 1409 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 A0A1W2PPW3 197 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 INSIG1O15503 277 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 ZNF208O43345 1280 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 CREG1O75629 220 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 FAM163BP0C2L3 166 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 NR2C1P13056 603 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 AKR1A1P14550 325 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 CKMT2P17540 419 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 CAPZA1P52907 286 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 EMX2Q04743 252 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 PRKCDQ05655 676 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 FUT2Q10981 343 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 GRSF1Q12849 480 aaKnown RBP eCLIP6.76□□□□□ -1.33
SORT1-209ENST00000538502 CHIT1Q13231 466 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 ECM1Q16610 540 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 MYLK3Q32MK0 819 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 RPL13AP3Q6NVV1 102 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 GALNTL5Q7Z4T8 443 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 COMMD7Q86VX2 200 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 GDPD1Q8N9F7 314 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 OR14K1Q8NGZ2 314 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 SCRN2Q96FV2 425 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 DMAC2Q9NW81 257 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 EIF2B4Q9UI10 523 aaKnown RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 MED31Q9Y3C7 131 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 MOXD2PA6NHM9 499 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 CLIC1O00299 241 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 BUD23O43709 281 aaKnown RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 CNTN5O94779 1100 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 IFNA17P01571 189 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 ITPKAP23677 461 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 ALDH3B2P48448 385 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 MAXP61244 160 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 ITPK1Q13572 414 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 NFE2L1Q14494 772 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 COL28A1Q2UY09 1125 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 CRY2Q49AN0 593 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 BORAQ6PGQ7 559 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 TSPAN33Q86UF1 283 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 CIR1Q86X95 450 aaPredicted RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 RPLP0P6Q8NHW5 317 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 PLD4Q96BZ4 506 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 TRIB3Q96RU7 358 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 HAPLN3Q96S86 360 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 TAPBPLQ9BX59 468 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 FBXW11Q9UKB1 542 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 FZD4Q9ULV1 537 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 COQ4Q9Y3A0 265 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 NOP16Q9Y3C1 178 aaKnown RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 CACNB4O00305 520 aaPredicted RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 SULT1C2O00338 296 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 LRRTM2O43300 516 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 SCN2BO60939 215 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 PIAS1O75925 651 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 MT-ND1P03886 318 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 MYCLP1P12525 358 aaPredicted RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 AMD1P17707 334 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 CPN2P22792 545 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 HTR2BP41595 481 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 GBE1Q04446 702 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 GRIK2Q13002 908 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 AIMP2Q13155 320 aaKnown RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 TLR1Q15399 786 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 FAAH2Q6GMR7 532 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 PIAS4Q8N2W9 510 aaPredicted RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 CIDECQ96AQ7 238 aaPredicted RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 MOAP1Q96BY2 351 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 TBATAQ96M53 351 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 TMEM106CQ9BVX2 250 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 HSD3B7Q9H2F3 369 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 MTG2Q9H4K7 406 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 SIX2Q9NPC8 291 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 NLGN3Q9NZ94 848 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 SIRPGQ9P1W8 387 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 FBXO10Q9UK96 956 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 STUB1Q9UNE7 303 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 GPSM3Q9Y4H4 160 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 FUOMA2VDF0 154 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 UBXN7O94888 489 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 DLDP09622 509 aaKnown RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 H2AFB2P0C5Z0 115 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 GDI2P50395 445 aaKnown RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 ZNF157P51786 506 aaPredicted RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 NFKB2Q00653 900 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 FAM198BQ6UWH4 519 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 GPR22Q99680 433 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 HNRNPABQ99729 332 aaKnown RBP6.76□□□□□ -1.33
SORT1-209ENST00000538502 WACQ9BTA9 647 aa6.76□□□□□ -1.33
SORT1-209ENST00000538502 NIFKQ9BYG3 293 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms