RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 AGPAT4Q9NRZ5 378 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 PSMD13Q9UNM6 376 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 DHRS7Q9Y394 339 aa10.55□□□□□ -0.72
NEDD8-204ENST00000526430 A0A1B0GUH1 482 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 OR52A4PA6NMU1 304 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 TSPAN12O95859 305 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 SHBGP04278 402 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 GSTM1P09488 218 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 COX6B1P14854 86 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 XRCC1P18887 633 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-204ENST00000526430 IDSP22304 550 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 FDXRP22570 491 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 GMPRP36959 345 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 PPARGP37231 505 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-204ENST00000526430 CD151P48509 253 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 TAS2R39P59534 338 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 RPS15P62841 145 aaKnown RBP10.54□□□□□ -0.72
NEDD8-204ENST00000526430 GSTM4Q03013 218 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 GRB7Q14451 532 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 BRD3Q15059 726 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 RPE65Q16518 533 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 VWA5B1Q5TIE3 1220 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 HECTD2Q5U5R9 776 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 IGFL3Q6UXB1 125 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 CEP128Q6ZU80 1094 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 MED25Q71SY5 747 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 CDH24Q86UP0 819 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 PPP1R3BQ86XI6 285 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 SLC22A15Q8IZD6 547 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 OTUD6BQ8N6M0 293 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 TMEM102Q8N9M5 508 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-204ENST00000526430 SIDT2Q8NBJ9 832 aaKnown RBP10.54□□□□□ -0.72
NEDD8-204ENST00000526430 PHC3Q8NDX5 983 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 HM13Q8TCT9 377 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 DCAKDQ8WVC6 231 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 SLC44A1Q8WWI5 657 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 ELMO1Q92556 727 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 KCNJ9Q92806 393 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 CAVIN3Q969G5 261 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 FAM136AQ96C01 138 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 VPS39Q96JC1 886 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 FCRL4Q96PJ5 515 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 GPR21Q99679 349 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 CPNE1Q99829 537 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-204ENST00000526430 WWP1Q9H0M0 922 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 RHOJQ9H4E5 214 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 EURLQ9NYK6 297 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 ZFATQ9P243 1243 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 FAM8A1Q9UBU6 413 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 KLHL3Q9UH77 587 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 IKZF3Q9UKT9 509 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 ACSL5Q9ULC5 683 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 NTNG1Q9Y2I2 539 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 VWA7Q9Y334 891 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 NFS1Q9Y697 457 aa10.54□□□□□ -0.72
NEDD8-204ENST00000526430 RTTNQ86VV8 2226 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 KLHL33A6NCF5 533 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 LILRA5A6NI73 299 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 QSOX1O00391 747 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 E2F3O00716 465 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 LIN7AO14910 233 aaPredicted RBP10.53□□□□□ -0.72
NEDD8-204ENST00000526430 SNX2O60749 519 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 FTH1P02794 183 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 STSP08842 583 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 CHRM3P20309 590 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 SSTR2P30874 369 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 STX2P32856 288 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 HSD17B3P37058 310 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 GP5P40197 560 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 CSE1LP55060 971 aaKnown RBP10.53□□□□□ -0.72
NEDD8-204ENST00000526430 RPS18P62269 152 aaKnown RBP10.53□□□□□ -0.72
NEDD8-204ENST00000526430 SH3BP2P78314 561 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 RPA4Q13156 261 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 SEPT7Q16181 437 aaKnown RBP10.53□□□□□ -0.72
NEDD8-204ENST00000526430 PTRHD1Q6GMV3 140 aaKnown RBP10.53□□□□□ -0.72
NEDD8-204ENST00000526430 PAQR3Q6TCH7 311 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
NEDD8-204ENST00000526430 ZNF295-AS1Q8N0V1 137 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 MZB1Q8WU39 189 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 ANKRD49Q8WVL7 239 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 NANOS1Q8WY41 292 aaKnown RBP10.53□□□□□ -0.72
NEDD8-204ENST00000526430 DLG3Q92796 817 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 RUFY1Q96T51 708 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 CYTH2Q99418 400 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 GPR22Q99680 433 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 ILKAPQ9H0C8 392 aaPredicted RBP10.53□□□□□ -0.72
NEDD8-204ENST00000526430 SLC40A1Q9NP59 571 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 KLHL42Q9P2K6 505 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 GNPTGQ9UJJ9 305 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 OSGIN2Q9Y236 505 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 VPS9D1Q9Y2B5 631 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 PCDHGA10Q9Y5H3 936 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 COMMD10Q9Y6G5 202 aa10.53□□□□□ -0.72
NEDD8-204ENST00000526430 NSD1Q96L73 2696 aaPredicted RBP10.52□□□□□ -0.72
NEDD8-204ENST00000526430 A0A087WUV0 522 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-204ENST00000526430 FAM95CA0A1B0GW59 222 aa10.52□□□□□ -0.73
NEDD8-204ENST00000526430 H3BMM5 538 aa10.52□□□□□ -0.73
NEDD8-204ENST00000526430 MATN4O95460 622 aa10.52□□□□□ -0.73
NEDD8-204ENST00000526430 RRADP55042 308 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms