RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ABCC9O60706 1549 aa4.29□□□□□ -1.72
HMGB1P1-201ENST00000522557 IGLV5-45A0A087WSX0 123 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 A0A0B4J203 849 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 H0YIG0 161 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 IGKV3-20P01619 116 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 UROSP10746 265 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 IRF2P14316 349 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 ITIH1P19827 911 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 DGKAP23743 735 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 IER3P46695 156 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 ST8SIA6P61647 398 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 TAF10Q12962 218 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 RPS6KA1Q15418 735 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 UGP2Q16851 508 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 HFEQ30201 348 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 ZNF672Q499Z4 452 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 LRRC73Q5JTD7 316 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 UNQ6126/PRO20091Q6UXV3 157 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 ZNF852Q6ZMS4 543 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 FOXL2NBQ6ZUU3 175 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 ZNF771Q7L3S4 317 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 GPR141Q7Z602 305 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 SFRP1Q8N474 314 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 TMCO5AQ8N6Q1 288 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 KCNH5Q8NCM2 988 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 OR52N5Q8NH56 324 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 GDAP1L1Q96MZ0 367 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 RTP3Q9BQQ7 232 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 ACTL8Q9H568 366 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 TLE6Q9H808 572 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 EVA1AQ9H8M9 152 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 SRD5A3Q9H8P0 318 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 SDR39U1Q9NRG7 319 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 MRPL17Q9NRX2 175 aaKnown RBP4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 CWC25Q9NXE8 425 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 P4HTMQ9NXG6 502 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 MDFICQ9P1T7 246 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 VPS18Q9P253 973 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 APPL1Q9UKG1 709 aa4.28□□□□□ -1.72
HMGB1P1-201ENST00000522557 SAA2-SAA4A0A096LPE2 208 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 F8VVB4 439 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 F8VWA3 439 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 DDX39AO00148 427 aaKnown RBP4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 ARPC2O15144 300 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 HTATSF1O43719 755 aaKnown RBP4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 TSHBP01222 138 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 GH1P01241 217 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 C9P02748 559 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 MT-ND3P03897 115 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 ANKRD34CP0C6C1 535 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 IGHV4-31P0DP07 118 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 VCLP18206 1134 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 MSH3P20585 1137 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 EFNA1P20827 205 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 MT3P25713 68 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 MNDAP41218 407 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 ZNF132P52740 706 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 PDX1P52945 283 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 DLX5P56178 289 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 STARD6P59095 220 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 LGALS3BPQ08380 585 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 RASGEF1BQ0VAM2 473 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 AP1B1Q10567 949 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 FUT11Q495W5 492 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 WBP2NLQ6ICG8 309 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 ALKBH5Q6P6C2 394 aaKnown RBP4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 TMEM270Q6UE05 265 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 USP43Q70EL4 1123 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 ZNF329Q86UD4 541 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 NFE4Q86UQ8 179 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 DZIP1Q86YF9 867 aaKnown RBP4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 CIARTQ8N365 385 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 ZNF843Q8N446 348 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 SPC24Q8NBT2 197 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 OR4K1Q8NGD4 311 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 NCOA7Q8NI08 942 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 LRRC8CQ8TDW0 803 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 SGF29Q96ES7 293 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 EPSTI1Q96J88 318 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 RASL10BQ96S79 203 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 ATG101Q9BSB4 218 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 GTPBP2Q9BX10 602 aaKnown RBP4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 PHPT1Q9NRX4 125 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 CYP39A1Q9NYL5 469 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 MIS18AQ9NYP9 233 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 TXNDC16Q9P2K2 825 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 JRKLQ9Y4A0 524 aa4.27□□□□□ -1.73
HMGB1P1-201ENST00000522557 LOC101059948A0A1B0GTJ6 334 aa4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 ILVBLA1L0T0 632 aa4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 GRID2O43424 1007 aa4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 AKAP3O75969 853 aa4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 LUC7L3O95232 432 aaKnown RBP4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 FRMD6-AS1P0C7T7 363 aa4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 MARK3P27448 753 aa4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 CCND3P30281 292 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 HOXA1P49639 335 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P1-201ENST00000522557 KIAA1024LP59773 190 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms