RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PCDH17O14917 1159 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 NKX2-8O15522 239 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 ASNA1O43681 348 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 RECQL5O94762 991 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 GFPT2O94808 682 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 ZFPL1O95159 310 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 IGSF6O95976 241 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 FGF1P05230 155 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 FGF3P11487 239 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 SFTPCP11686 197 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 PECAM1P16284 738 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 CHRNB2P17787 502 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 EPHB2P29323 1055 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 SDC4P31431 198 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 RFC1P35251 1148 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 PTDSS1P48651 473 aaKnown RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 HMGA2P52926 109 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 PNLIPRP1P54315 467 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 MAZP56270 477 aaKnown RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 HDAC4P56524 1084 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 B4GALNT1Q00973 533 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 ELP6Q0PNE2 266 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 KCNAB1Q14722 419 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 C16orf72Q14CZ0 275 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 TPD52L1Q16890 204 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 INSCQ1MX18 579 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 CD300EQ496F6 205 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 C14orf28Q4W4Y0 310 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 MIIPQ5JXC2 388 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 CERCAMQ5T4B2 595 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM108Q6UXF1 575 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 RHOUQ7L0Q8 258 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 SLFN11Q7Z7L1 901 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 PIM3Q86V86 326 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 PELI3Q8N2H9 469 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 OR6C4Q8NGE1 309 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 OR56A4Q8NGH8 313 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 OR1N1Q8NGS0 311 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 FAM172AQ8WUF8 416 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 SLC20A1Q8WUM9 679 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 TBC1D31Q96DN5 1066 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 PDXPQ96GD0 296 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 TBATAQ96M53 351 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 NCAPGQ9BPX3 1015 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 NUDT22Q9BRQ3 303 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 TUBGCP2Q9BSJ2 902 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 PTDSS2Q9BVG9 487 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 PCDHAC1Q9H158 963 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 NDST4Q9H3R1 872 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 UNKLQ9H9P5 680 aaKnown RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 FGF22Q9HCT0 170 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 ZNF71Q9NQZ8 489 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 DKK3Q9UBP4 350 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 LHX3Q9UBR4 397 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 APPL1Q9UKG1 709 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 NEU3Q9UQ49 428 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 MFHAS1Q9Y4C4 1052 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 UBR5O95071 2799 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 CREBBPQ92793 2442 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 USP9YO00507 2555 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 IGHV5-10-1A0A0J9YXX1 117 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 CXorf51AA0A1B0GTR3 108 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 ZSCAN5CA6NGD5 496 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 C2CD4BA6NLJ0 364 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 F5H697 171 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 CACNB4O00305 520 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 PPM1DO15297 605 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 NUDT21O43809 227 aaKnown RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 PPFIA2O75334 1257 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 SPDEFO95238 335 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 CPNE6O95741 557 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 LSM8O95777 96 aaKnown RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 KRT3P12035 628 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 LIFP15018 202 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 UCHL3P15374 230 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 NPPBP16860 134 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 MMP8P22894 467 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 AK4P27144 223 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 CD1CP29017 333 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 PPIFP30405 207 aaKnown RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 TRIM23P36406 574 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 RGRP47804 291 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 POLD2P49005 469 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 KLK7P49862 253 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 ARL4CP56559 192 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 TUBB3Q13509 450 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 ACOX1Q15067 660 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 PTPRRQ15256 657 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 ZNF750Q32MQ0 723 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.11□□□□□ -1.59
PTCD3-219ENST00000494323 CFAP58Q5T655 872 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 DENND2CQ68D51 928 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 SPECC1LQ69YQ0 1117 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 PNCKQ6P2M8 343 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 WDR59Q6PJI9 974 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 RFX8Q6ZV50 586 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 ARCQ7LC44 396 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 KRT73Q86Y46 540 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 DNAAF5Q86Y56 855 aa5.11□□□□□ -1.59
PTCD3-219ENST00000494323 NRROSQ86YC3 692 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms