RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 KCNC4Q03721 635 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 NCF4Q15080 339 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 LACTB2Q53H82 288 aaPredicted RBP12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 TEDDM1Q5T9Z0 273 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 FCRL6Q6DN72 434 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 TCTN3Q6NUS6 607 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 KIAA0408Q6ZU52 694 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 LRRC6Q86X45 466 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 PPM1NQ8N819 430 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 OR2L8Q8NGY9 312 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 FAM136AQ96C01 138 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 GBP5Q96PP8 586 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 CYTH2Q99418 400 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 PLAC1Q9HBJ0 212 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 MLXIPLQ9NP71 852 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC22A11Q9NSA0 550 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 MOCS1Q9NZB8 636 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 GNPTGQ9UJJ9 305 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 RAB21Q9UL25 225 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 CRYL1Q9Y2S2 319 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 MAST4O15021 2626 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 CCDC88CQ9P219 2028 aa12.2□□□□□ -0.46
SEC61A1-206ENST00000491668 A0A1W2PPV9 198 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 ARGFXA6NJG6 315 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 RASGRF2O14827 1237 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 ZSCAN9O15535 394 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 MAP3K7O43318 606 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 RIPK2O43353 540 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 NRP2O60462 931 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 MATN4O95460 622 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 PSMB5P28074 263 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 CASRP41180 1078 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 ADARP55265 1226 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 MPP1Q00013 466 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 TMED2Q15363 201 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 UAP1Q16222 522 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 KLHL38Q2WGJ6 581 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 KBTBD12Q3ZCT8 623 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 ACSBG2Q5FVE4 666 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 C1orf189Q5VU69 101 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 RHBDD2Q6NTF9 364 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 ZNF549Q6P9A3 640 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 CYS1Q717R9 158 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 OTOAQ7RTW8 1153 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 STRA8Q7Z7C7 330 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC26A11Q86WA9 606 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 ZBTB2Q8N680 514 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 ZNF655Q8N720 491 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 C2CD4AQ8NCU7 369 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 GIMAP7Q8NHV1 300 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 AENQ8WTP8 325 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 THAP4Q8WY91 577 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 PANX3Q96QZ0 392 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC30A3Q99726 388 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 CCDC77Q9BR77 488 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 EURLQ9NYK6 297 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 DHCR7Q9UBM7 475 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 TSR3Q9UJK0 312 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 SNX7Q9UNH6 387 aa12.19□□□□□ -0.46
SEC61A1-206ENST00000491668 EXOC1LA0A1B0GW35 172 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 FAM159BA6NKW6 160 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 E5RI56 91 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 POC1B-GALNT4F8VUJ3 575 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 H3BMM5 538 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 MKRN2OSH3BPM6 223 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 CTSVO60911 334 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 CEACAM4O75871 244 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 PIAS1O75925 651 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 HAUS5O94927 633 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ESR1P03372 595 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 RPN2P04844 631 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 GRIA3P42263 894 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 CLCN7P51798 805 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ILF2Q12905 390 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 NAB1Q13506 487 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 FASTKQ14296 549 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC29A2Q14542 456 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 IGFBP7Q16270 282 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 CNSTQ6PJW8 725 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ASB18Q6ZVZ8 466 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 MCATQ8IVS2 390 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 CNTN4Q8IWV2 1026 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 GPR135Q8IZ08 494 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 OR2A1Q8NGT9 310 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 HMGCLL1Q8TB92 370 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 CAVIN3Q969G5 261 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ZNF285Q96NJ3 590 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 CPNE1Q99829 537 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 DPH2Q9BQC3 489 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ING2Q9H160 280 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 SYNPO2LQ9H987 977 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ENAMQ9NRM1 1142 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ARGLU1Q9NWB6 273 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 SLC17A6Q9P2U8 582 aa12.18□□□□□ -0.46
SEC61A1-206ENST00000491668 ANAPC2Q9UJX6 822 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms