RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TRIM17Q9Y577 477 aa3.8□□□□□ -1.8
UBR3-209ENST00000477461 UBIAD1Q9Y5Z9 338 aa3.8□□□□□ -1.8
UBR3-209ENST00000477461 CLIC4Q9Y696 253 aa3.8□□□□□ -1.8
UBR3-209ENST00000477461 MYH9P35579 1960 aaKnown RBP3.8□□□□□ -1.8
UBR3-209ENST00000477461 DOCK5Q9H7D0 1870 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 LRRC37A2A6NM11 1700 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 KANSL1LA0AUZ9 987 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 FAM86B1E9PN63 330 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 M0QZ24 198 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 DDX39AO00148 427 aaKnown RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 MSH4O15457 936 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 KCNN4O15554 427 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CHMP2AO43633 222 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 SLC37A4O43826 429 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 GH1P01241 217 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 HIST1H2ABP04908 130 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 FAM86B2P0C5J1 330 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 HIST1H2ADP20671 130 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CHRNB4P30926 498 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 LONP1P36776 959 aaKnown RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 PSMB10P40306 273 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 APOBEC1P41238 236 aaKnown RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 HOXA1P49639 335 aaPredicted RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 LBX1P52954 281 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 NAP1L1P55209 391 aaKnown RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 KRTAP10-3P60369 221 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 SP4Q02446 784 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 LRMPQ12912 555 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 MAD2L1Q13257 205 aaPredicted RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.8
UBR3-209ENST00000477461 ACVR2BQ13705 512 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 NAB2Q15742 525 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CCL14Q16627 93 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 SFMBT2Q5VUG0 894 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 KLHL35Q6PF15 583 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CCDC73Q6ZRK6 1079 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CLEC17AQ6ZS10 378 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 IKBIPQ70UQ0 350 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 HIST3H2AQ7L7L0 130 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 MIER3Q7Z3K6 550 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 FBXO16Q8IX29 292 aaPredicted RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 STPG4Q8N801 248 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 LINC00301Q8NCQ3 95 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 ADAD2Q8NCV1 583 aaKnown RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 OR52I2Q8NH67 350 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CRYGNQ8WXF5 182 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 PIGTQ969N2 578 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 RHBDF1Q96CC6 855 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 LINGO1Q96FE5 620 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 STAMBPL1Q96FJ0 436 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CALML4Q96GE6 196 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 GRAMD2BQ96HH9 432 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CMTM3Q96MX0 182 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 MBOAT7Q96N66 472 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 OR2A14Q96R47 310 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 RIT2Q99578 217 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 NCAPGQ9BPX3 1015 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CHCHD6Q9BRQ6 235 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 FTOQ9C0B1 505 aaKnown RBP eCLIP3.79□□□□□ -1.8
UBR3-209ENST00000477461 BLOC1S4Q9NUP1 217 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 MTMR10Q9NXD2 777 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 LRWD1Q9UFC0 647 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 OR14J1Q9UGF5 321 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 NRBP1Q9UHY1 535 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 CORO1CQ9ULV4 474 aaPredicted RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 TMEM184BQ9Y519 407 aaPredicted RBP3.79□□□□□ -1.8
UBR3-209ENST00000477461 SESN1Q9Y6P5 492 aa3.79□□□□□ -1.8
UBR3-209ENST00000477461 LOXHD1Q8IVV2 1947 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 ASTN1O14525 1302 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 NFASCO94856 1347 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 ELP1O95163 1332 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 IGLV3-22A0A075B6J6 115 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 FAM90A26D6RGX4 464 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 BLOC1S5-TXNDC5H3BN57 136 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 ZNHIT1O43257 154 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 DKC1O60832 514 aaKnown RBP eCLIP3.78□□□□□ -1.8
UBR3-209ENST00000477461 PSMD10O75832 226 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 GGPS1O95749 300 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 SNAI1O95863 264 aaPredicted RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 MBD3O95983 291 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 EGFP01133 1207 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 HSPA8P11142 646 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 RARGP13631 454 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 PAX1P15863 534 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 SFNP31947 248 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 CCT6AP40227 531 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 CASP2P42575 452 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 CLNS1AP54105 237 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 UBE2HP62256 183 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 EEF1A1P68104 462 aaKnown RBP3.78□□□□□ -1.8
UBR3-209ENST00000477461 PDIA5Q14554 519 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 PNLIPRP3Q17RR3 467 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 DUSP28Q4G0W2 176 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 TMEM35AQ53FP2 167 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 EEF1A1P5Q5VTE0 462 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 KRT79Q5XKE5 535 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 ADALQ6DHV7 355 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 ZNF280DQ6N043 979 aa3.78□□□□□ -1.8
UBR3-209ENST00000477461 MZT2BQ6NZ67 158 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms