RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ARL5BQ96KC2 179 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CATSPER2Q96P56 530 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 TWNKQ96RR1 684 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CCDC86Q9H6F5 360 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PLEKHA1Q9HB21 404 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 NUDT4Q9NZJ9 180 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 GLS2Q9UI32 602 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ARL2BPQ9Y2Y0 163 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 AP1M2Q9Y6Q5 423 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 SPTAN1Q13813 2472 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 NSG1A0A0A6YYJ2 146 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 TLR4O00206 839 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PLK4O00444 970 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 TPP1O14773 563 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 AZIN1O14977 448 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ARHGEF15O94989 841 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CAPN1P07384 714 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PABPC4LP0CB38 370 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF823P16415 610 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CD70P32970 193 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CDKN1CP49918 316 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 AQP5P55064 265 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 UBE2NP61088 152 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 LRP8Q14114 963 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CYP27C1Q4G0S4 372 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 GTF2IRD2BQ6EKJ0 949 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 TCEAL6Q6IPX3 200 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 GALNT18Q6P9A2 607 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 GTF2IRD2Q86UP8 949 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 NLGN4XQ8N0W4 816 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF567Q8N184 647 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 FBXO30Q8TB52 745 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PHF10Q8WUB8 498 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 NXPE2Q96DL1 559 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 RNFT2Q96EX2 444 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 LENG8Q96PV6 779 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 APOOQ9BUR5 198 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 MTG2Q9H4K7 406 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 TRIM39Q9HCM9 518 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF334Q9HCZ1 680 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ZCCHC3Q9NUD5 404 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PRODH2Q9UF12 536 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 EBF1Q9UH73 591 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ELOA3DA6NLF2 546 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PCDHGA12O60330 932 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PRAMEF11O60813 436 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CNOT3O75175 753 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PRG2P13727 222 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 MYL12AP19105 171 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 DNAJB1P25685 340 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 SLC6A11P48066 632 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 SH3BGRP55822 239 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PRKD1Q15139 912 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 MEA1Q16626 185 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ZSCAN26Q16670 478 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ELOA3BQ3SY89 546 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 WLSQ5T9L3 541 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 FAM69BQ5VUD6 431 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 DEF8Q6ZN54 512 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 GCNT7Q6ZNI0 430 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 LNX2Q8N448 690 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 SFRP1Q8N474 314 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF276Q8N554 614 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CLDN19Q8N6F1 224 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 TTC9BQ8N6N2 239 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ELOA3Q8NG57 546 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 OR13C4Q8NGS5 318 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 CKAP2Q8WWK9 683 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PYCR2Q96C36 320 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 ZSWIM3Q96MP5 696 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 PELOQ9BRX2 385 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 GRIP2Q9C0E4 1043 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 RETREG1Q9H6L5 497 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 LRTM1Q9HBL6 345 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 EFR3BQ9Y2G0 817 aa7.04□□□□□ -1.28
CNOT4-206ENST00000428680 COPG1Q9Y678 874 aaKnown RBP7.04□□□□□ -1.28
CNOT4-206ENST00000428680 FAM237AA0A1B0GTK4 181 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SEC14L5O43304 696 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 TP53P04637 393 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 TPOP07202 933 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CHN1P15882 459 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ITGA2P17301 1181 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SOX6P35712 828 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ENPP2Q13822 863 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CMTM7Q96FZ5 175 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ZFRQ96KR1 1074 aaKnown RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 OR52E6Q96RD3 313 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 MTERF1Q99551 399 aaKnown RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SEPHS2Q99611 448 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SH3GL3Q99963 347 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 REEP1Q9H902 201 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 ANKMY1Q9P2S6 941 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SCOCQ9UIL1 159 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 IKZF2Q9UKS7 526 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 PRR23D1E9PI22 279 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 MRASO14807 208 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 SMNDC1O75940 238 aaKnown RBP eCLIP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 PRR23D2P0DMB1 279 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-206ENST00000428680 CLUP10909 449 aa7.03□□□□□ -1.28
CNOT4-206ENST00000428680 PROZP22891 400 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms