RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 NRP2O60462 931 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 RASSF9O75901 435 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 IPO13O94829 963 aaKnown RBP15.35■□□□□ 0.05
HMGA1-204ENST00000401473 MT-CO3P00414 261 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 ST6GAL1P15907 406 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 EPORP19235 508 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 SEPHS1P49903 392 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 ZIC1Q15915 447 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 ISXQ2M1V0 245 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 THEMIS2Q5TEJ8 643 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 CACHD1Q5VU97 1274 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 PRAMEF13Q5VWM6 474 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 ICE2Q659A1 982 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 RPS27LQ71UM5 84 aaKnown RBP15.35■□□□□ 0.05
HMGA1-204ENST00000401473 KLHDC8AQ8IYD2 350 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 TCAIMQ8N3R3 496 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 CCDC74BQ96LY2 380 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 TRAPPC9Q96Q05 1148 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 ZMYND15Q9H091 742 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 IQCGQ9H095 443 aaKnown RBP15.35■□□□□ 0.05
HMGA1-204ENST00000401473 KCNK9Q9NPC2 374 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 C1GALT1Q9NS00 363 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 COPG2Q9UBF2 871 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 DMXL2Q8TDJ6 3036 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 TLCD2A6NGC4 264 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 HYAL3O43820 417 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-204ENST00000401473 PRAMEF4O60810 478 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 SMIM24O75264 130 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 WDR47O94967 919 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 S100BP04271 92 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-204ENST00000401473 CPA3P15088 417 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 MAGP20916 626 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 CDH3P22223 829 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 CCND1P24385 295 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 ATP5F1P24539 256 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-204ENST00000401473 GRIA3P42263 894 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 PCBP2Q15366 365 aaKnown RBP eCLIP15.35■□□□□ 0.051e-16■■■□□ 16.2
HMGA1-204ENST00000401473 SLC5A12Q1EHB4 618 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 PRAMEF9Q5VWM5 478 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 DCBLD1Q8N8Z6 715 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 NEIL2Q969S2 332 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 DPYSL5Q9BPU6 564 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 SLC6A20Q9NP91 592 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 CUEDC1Q9NWM3 386 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-204ENST00000401473 CLCA2Q9UQC9 943 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 TMEM120BA0PK00 339 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 E2F3O00716 465 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 CCNT2O60583 730 aaKnown RBP15.34■□□□□ 0.05
HMGA1-204ENST00000401473 NFKB2Q00653 900 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 PCLAFQ15004 111 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 PHF19Q5T6S3 580 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 LCTLQ6UWM7 567 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 ZYG11AQ6WRX3 759 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 CCDC63Q8NA47 563 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 UBTD2Q8WUN7 234 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 KLHL6Q8WZ60 621 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 NSUN5Q96P11 429 aaKnown RBP15.34■□□□□ 0.05
HMGA1-204ENST00000401473 CD180Q99467 661 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 DPH7Q9BTV6 452 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 MECRQ9BV79 373 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 CNOT10Q9H9A5 744 aaKnown RBP15.34■□□□□ 0.05
HMGA1-204ENST00000401473 ZBTB26Q9HCK0 441 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 FAM60AQ9NP50 221 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 CHD8Q9HCK8 2581 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 CFAP47Q6ZTR5 3102 aa15.34■□□□□ 0.05
HMGA1-204ENST00000401473 A0A0J9YY10 115 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 A0A1W2PNU3 283 aaPredicted RBP15.33■□□□□ 0.05
HMGA1-204ENST00000401473 STX16-NPEPL1H3BU86 382 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 H7BY64 318 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 STX16O14662 325 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 TOX3O15405 576 aaPredicted RBP15.33■□□□□ 0.05
HMGA1-204ENST00000401473 ATP8B1O43520 1251 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 HCRTR1O43613 425 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 SPINK2P20155 84 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 TAC1P20366 129 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 EEF1DP29692 281 aaKnown RBP15.33■□□□□ 0.05
HMGA1-204ENST00000401473 PRKAA2P54646 552 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 INHBCP55103 352 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 FOXC1Q12948 553 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 TARDBPQ13148 414 aaKnown RBP eCLIP15.33■□□□□ 0.05
HMGA1-204ENST00000401473 C16orf72Q14CZ0 275 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 CATSPEREQ5SY80 951 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 FCRL6Q6DN72 434 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 PRSS42Q7Z5A4 293 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 C10orf107Q8IVU9 208 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 GOLGA6L1Q8N7Z2 621 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 PRAP1Q96NZ9 151 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 TMEM237Q96Q45 408 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 MRPS30Q9NP92 439 aaKnown RBP15.33■□□□□ 0.05
HMGA1-204ENST00000401473 OXSMQ9NWU1 459 aa15.33■□□□□ 0.05
HMGA1-204ENST00000401473 AHCTF1Q8WYP5 2266 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 K7EPI3 171 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 PPP6CO00743 305 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 CSO75390 466 aaKnown RBP15.33■□□□□ 0.04
HMGA1-204ENST00000401473 MYL2P10916 166 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 JUPP14923 745 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 IMPDH1P20839 514 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 CCKBRP32239 447 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 KCNAB1Q14722 419 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 ZNF678Q5SXM1 525 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms