RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 POF1BQ8WVV4 589 aa10.14□□□□□ -0.79
CPSF1P1-201ENST00000397477 GALNT8Q9NY28 637 aa10.14□□□□□ -0.79
CPSF1P1-201ENST00000397477 VPS29Q9UBQ0 182 aa10.14□□□□□ -0.79
CPSF1P1-201ENST00000397477 C3orf18Q9UK00 162 aa10.14□□□□□ -0.79
CPSF1P1-201ENST00000397477 ACSL6Q9UKU0 697 aa10.14□□□□□ -0.79
CPSF1P1-201ENST00000397477 BLOC1S6Q9UL45 172 aa10.14□□□□□ -0.79
CPSF1P1-201ENST00000397477 TULP3O75386 442 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 FADS2O95864 444 aaKnown RBP10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 NUDT7P0C024 238 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 EPORP19235 508 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 ITGB8P26012 769 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 METAP1P53582 386 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 RPS13P62277 151 aaKnown RBP10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 NKG7Q16617 165 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 SLC36A3Q495N2 470 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 TCEAL5Q5H9L2 206 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 P3H2Q8IVL5 708 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 C10orf111Q8N326 155 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 OR4A15Q8NGL6 344 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 TSPEARQ8WU66 669 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 MIEF1Q9NQG6 463 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 SPHK2Q9NRA0 654 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 DOLKQ9UPQ8 538 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZNF510Q9Y2H8 683 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 DYTNA2CJ06 578 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 BCKDKO14874 412 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 KLK8O60259 260 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 FAM20BO75063 409 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 ATG13O75143 517 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 C8GP07360 202 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 PFKLP17858 780 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 MYF6P23409 242 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 JAK1P23458 1154 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 PSMD8P48556 350 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 DGKGP49619 791 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 NUP107P57740 925 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 TMEM115Q12893 351 aaPredicted RBP10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 GLB1L3Q8NCI6 653 aaPredicted RBP10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZNF540Q8NDQ6 660 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 OR2A12Q8NGT7 310 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 HM13Q8TCT9 377 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 REEP1Q9H902 201 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 PCDHGA11Q9Y5H2 935 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 MYLKQ15746 1914 aa10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZFC3H1O60293 1989 aaKnown RBP10.13□□□□□ -0.79
CPSF1P1-201ENST00000397477 ABHD14A-ACY1A0A1B0GW23 586 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 M0R3G1 203 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 KPNA5O15131 536 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 SCELO95171 688 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PTPN2P17706 415 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PIGAP37287 484 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 CDK9P50750 372 aaKnown RBP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PSMD7P51665 324 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 NKX3-2P78367 333 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 CAMK2GQ13555 558 aaPredicted RBP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZBED5Q49AG3 693 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 CATSPEREQ5SY80 951 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 HTR3DQ70Z44 454 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 HMGN2P46Q86SG4 172 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 MMAAQ8IVH4 418 aaKnown RBP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 TAGAPQ8N103 731 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PACRGLQ8N7B6 248 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 SMYD1Q8NB12 490 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ATG2BQ96BY7 2078 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZSWIM3Q96MP5 696 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 DUSP26Q9BV47 211 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 MUC13Q9H3R2 512 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 LMCD1Q9NZU5 365 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZNF236Q9UL36 1845 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PCDHGA8Q9Y5G5 932 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 TCRBV5S2A0A599 114 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ARHGEF33A8MVX0 844 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ACOX3O15254 700 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ATE1O95260 518 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PHC1P78364 1004 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 GRIK2Q13002 908 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 DMC1Q14565 340 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 MAPK11Q15759 364 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 COQ5Q5HYK3 327 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 EZH1Q92800 747 aaPredicted RBP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 TMEM121BQ9BXQ6 578 aaPredicted RBP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 SLC2A11Q9BYW1 496 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ATXN10Q9UBB4 475 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 TRPS1Q9UHF7 1281 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ERVW-1Q9UQF0 538 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 LATO43561 262 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ANGPTL1O95841 491 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PRR35P0CG20 571 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PRPS2P11908 318 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 CCNA2P20248 432 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 RPS3P23396 243 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 AOAHP28039 575 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 PRKAG1P54619 331 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 MC1RQ01726 317 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 C2orf80Q0P641 193 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 ITGADQ13349 1161 aa10.12□□□□□ -0.79
CPSF1P1-201ENST00000397477 APOFQ13790 326 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms