RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 CDKN2CP42773 168 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 EEFSECP57772 596 aaKnown RBP12.32□□□□□ -0.44
DDR1-226ENST00000376569 TYSND1Q2T9J0 566 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 NHSL2Q5HYW2 709 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 CATSPEREQ5SY80 951 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 PPP4R4Q6NUP7 873 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 NOXRED1Q6NXP6 359 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 TRIB3Q96RU7 358 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 DUSP26Q9BV47 211 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 ACPTQ9BZG2 426 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 XKR8Q9H6D3 395 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 PDFQ9HBH1 243 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 TRIM39Q9HCM9 518 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 PTTG2Q9NZH5 202 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 HCFC2Q9Y5Z7 792 aa12.32□□□□□ -0.44
DDR1-226ENST00000376569 ATG13O75143 517 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 NADKO95544 446 aaPredicted RBP12.31□□□□□ -0.44
DDR1-226ENST00000376569 IL6P05231 212 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 ENO2P09104 434 aaPredicted RBP12.31□□□□□ -0.44
DDR1-226ENST00000376569 LHCGRP22888 699 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 RAB39AQ14964 217 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 PIWIL3Q7Z3Z3 882 aaKnown RBP12.31□□□□□ -0.44
DDR1-226ENST00000376569 C7orf57Q8NEG2 295 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 LZICQ8WZA0 190 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 UBE2FQ969M7 185 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 ABCB10Q9NRK6 738 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 ADPRHL2Q9NX46 363 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 DEC1Q9P2X7 70 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 DAPK2Q9UIK4 370 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 FZD4Q9ULV1 537 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 GPSM3Q9Y4H4 160 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 TCRBV3S1A0A5B6 114 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 TMEM189-UBE2V1I3L0A0 370 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 CDH1P12830 882 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 DOC2AQ14183 400 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 PSRC1Q6PGN9 363 aaPredicted RBP12.31□□□□□ -0.44
DDR1-226ENST00000376569 ZNF683Q8IZ20 524 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 GPR150Q8NGU9 434 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 IRF7Q92985 503 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 PKP4Q99569 1192 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 TMEM175Q9BSA9 504 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 PCDHB3Q9Y5E6 796 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 LSM1O15116 133 aaKnown RBP12.31□□□□□ -0.44
DDR1-226ENST00000376569 TAPBPO15533 448 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 VIPP01282 170 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 CLTBP09497 229 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 TIAL1Q01085 375 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDR1-226ENST00000376569 TMEM115Q12893 351 aaPredicted RBP12.31□□□□□ -0.44
DDR1-226ENST00000376569 MTA1Q13330 715 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 SMN1Q16637 294 aaKnown RBP12.31□□□□□ -0.44
DDR1-226ENST00000376569 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.31□□□□□ -0.44
DDR1-226ENST00000376569 SLC39A5Q6ZMH5 540 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 PSMA8Q8TAA3 256 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 PPCDCQ96CD2 204 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 IL4I1Q96RQ9 567 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 NODALQ96S42 347 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 MARCH7Q9H992 704 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 ITM2CQ9NQX7 267 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 OLAHQ9NV23 265 aa12.31□□□□□ -0.44
DDR1-226ENST00000376569 M0QX08 132 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 VILLO15195 856 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 NME6O75414 186 aaPredicted RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 SERPINI2O75830 405 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 SMIM18P0DKX4 95 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 HOXC8P31273 242 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 MANFP55145 182 aaKnown RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 ERVFC1P60507 584 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 TRAF3Q13114 568 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 PON2Q15165 354 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 CCSAPQ6IQ19 270 aaPredicted RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 SPRED2Q7Z698 418 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 SCML4Q8N228 414 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 ZCCHC7Q8N3Z6 543 aaKnown RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 DACT3Q96B18 629 aaPredicted RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 ISOC1Q96CN7 298 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 VN1R3Q9BXE9 311 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 OSBPL6Q9BZF3 934 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 TPT1P8Q9HAU6 139 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 CLCA2Q9UQC9 943 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 KLHL20Q9Y2M5 609 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 PLXNA1Q9UIW2 1896 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 KLHL33A6NCF5 533 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 PCDH7O60245 1069 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 EEDO75530 441 aaKnown RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 APOL3O95236 402 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 PAK4O96013 591 aaPredicted RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 ASLP04424 464 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 LSAMPQ13449 338 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 GRM2Q14416 872 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 MED22Q15528 200 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 GPR33Q49SQ1 333 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 PYCR3Q53H96 274 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 TCEAL5Q5H9L2 206 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 CCNYL2Q5T2Q4 361 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 MEX3DQ86XN8 651 aaKnown RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 TTC29Q8NA56 475 aaPredicted RBP12.3□□□□□ -0.44
DDR1-226ENST00000376569 SCRN2Q96FV2 425 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 NRTNQ99748 197 aa12.3□□□□□ -0.44
DDR1-226ENST00000376569 GRXCR1A8MXD5 290 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms