RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ACPTQ9BZG2 426 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 SMOXQ9NWM0 555 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 IMPAD1Q9NX62 359 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 TBC1D14Q9P2M4 693 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 TBX21Q9UL17 535 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 SCN10AQ9Y5Y9 1956 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 FAM234BA2RU67 622 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 PRRT4C9JH25 899 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 SLC28A1O00337 649 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 HTRA2O43464 458 aaPredicted RBP12.93□□□□□ -0.34
CASC4-202ENST00000345795 VPS4BO75351 444 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 C9P02748 559 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 C1SP09871 688 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 CDH1P12830 882 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
CASC4-202ENST00000345795 PRDX6P30041 224 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 CARTPTQ16568 116 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■■□ 26.1
CASC4-202ENST00000345795 MFSD4BQ5TF39 518 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 WDR53Q7Z5U6 358 aaPredicted RBP12.93□□□□□ -0.34
CASC4-202ENST00000345795 NUS1Q96E22 293 aa12.93□□□□□ -0.34
CASC4-202ENST00000345795 THG1LQ9NWX6 298 aaKnown RBP12.93□□□□□ -0.34
CASC4-202ENST00000345795 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
CASC4-202ENST00000345795 WASHC1A8K0Z3 465 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 CLIC1O00299 241 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 HNRNPRO43390 633 aaKnown RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 CAPN15O75808 1086 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 LAMP1P11279 417 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 TAS2R50P59544 299 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 PPIGQ13427 754 aaKnown RBP eCLIP12.92□□□□□ -0.34
CASC4-202ENST00000345795 USP39Q53GS9 565 aaKnown RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 SDE2Q6IQ49 451 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 NEK5Q6P3R8 708 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 WASH2PQ6VEQ5 465 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 FRS2Q8WU20 508 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 OSCP1Q8WVF1 389 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 MYRFLQ96LU7 910 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 MAGEB10Q96LZ2 347 aaPredicted RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 IKZF5Q9H5V7 419 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 PRAMEF33A0A0G2JMD5 474 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 ARHGEF33A8MVX0 844 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 RASGRP1O95267 797 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 C6P13671 934 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 ATP6V1E1P36543 226 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 CDKN2CP42773 168 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 CLDN2P57739 230 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 CCNYL2Q5T2Q4 361 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 MMP21Q8N119 569 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 PSD4Q8NDX1 1056 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 GLYATL1Q969I3 302 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 L3HYPDHQ96EM0 354 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 RBCK1Q9BYM8 510 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 SDR39U1Q9NRG7 319 aaPredicted RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 GEMIN8Q9NWZ8 242 aaKnown RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 VPS29Q9UBQ0 182 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 TAPBPO15533 448 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 PCDH7O60245 1069 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 CACNG3O60359 315 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 RPS17P08708 135 aaKnown RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 RPL5P46777 297 aaKnown RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 MANFP55145 182 aaKnown RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 HYAL2Q12891 473 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 TYSND1Q2T9J0 566 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 CAPN13Q6MZZ7 669 aaPredicted RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 PRMT9Q6P2P2 845 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 CPA6Q8N4T0 437 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 ADAMTS19Q8TE59 1207 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 TFGQ92734 400 aaPredicted RBP12.92□□□□□ -0.34
CASC4-202ENST00000345795 NELL1Q92832 810 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 TRAPPC9Q96Q05 1148 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 ZNF382Q96SR6 550 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 MARCH7Q9H992 704 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 PCDHB14Q9Y5E9 798 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 GPR45Q9Y5Y3 372 aa12.92□□□□□ -0.34
CASC4-202ENST00000345795 SMIM30A4D0T7 59 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
CASC4-202ENST00000345795 APOL3O95236 402 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 FADS2O95864 444 aaKnown RBP12.91□□□□□ -0.34
CASC4-202ENST00000345795 SSR2P43308 183 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 GALK1P51570 392 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 TIAL1Q01085 375 aaKnown RBP eCLIP12.91□□□□□ -0.34
CASC4-202ENST00000345795 TMEM215Q68D42 235 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 RRM2BQ7LG56 351 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 ZDHHC21Q8IVQ6 265 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 RASGEF1AQ8N9B8 481 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 HMGB4Q8WW32 186 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 PPCDCQ96CD2 204 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 PKP4Q99569 1192 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 WDR90Q96KV7 1748 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 RIF1Q5UIP0 2472 aaKnown RBP12.91□□□□□ -0.34
CASC4-202ENST00000345795 ASXL3Q9C0F0 2248 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 FSHRP23945 695 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 VIPR1P32241 457 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 CDH12P55289 794 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 MERTKQ12866 999 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 GPR33Q49SQ1 333 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 SNAP47Q5SQN1 464 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 NOXRED1Q6NXP6 359 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 PRSS58Q8IYP2 241 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms