RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 WBP2Q969T9 261 aa9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 MTFMTQ96DP5 389 aaKnown RBP9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 FERD3LQ96RJ6 166 aa9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 YTHDF1Q9BYJ9 559 aaKnown RBP9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 RIBC2Q9H4K1 309 aa9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 PAK1IP1Q9NWT1 392 aaPredicted RBP9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 COMMD8Q9NX08 183 aa9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 ERVK13-1Q9NX77 482 aa9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 CCL27Q9Y4X3 112 aa9.17□□□□□ -0.94
HLA-DOA-201ENST00000229829 PIKFYVEQ9Y2I7 2098 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 MTMR11A4FU01 709 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 MOXD2PA6NHM9 499 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 TAPBPO15533 448 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 ACSL4O60488 711 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 TULP3O75386 442 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 ALPIP09923 528 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 GATMP50440 423 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 FCHO2Q0JRZ9 810 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 MBTPS1Q14703 1052 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 C6orf141Q5SZD1 244 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 C17orf99Q6UX52 265 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 MILR1Q7Z6M3 343 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 LYSMD2Q8IV50 215 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 C2orf69Q8N8R5 385 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZNF548Q8NEK5 533 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 SLC13A3Q8WWT9 602 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 KCNJ9Q92806 393 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 SNAPC3Q92966 411 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 FKBP10Q96AY3 582 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZNF641Q96N77 438 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 TUBA1CQ9BQE3 449 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 CIPCQ9C0C6 399 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 ARHGAP39Q9C0H5 1083 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 MAGEH1Q9H213 219 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 RUBCNLQ9H714 662 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 GPN2Q9H9Y4 310 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 EXOSC4Q9NPD3 245 aaKnown RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 ERVK-18Q9QC07 812 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 PLXNA4Q9HCM2 1894 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 COL4A2P08572 1712 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 FFAR2O15552 330 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 CD160O95971 181 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 NPPAP01160 153 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 CSF2P04141 144 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 JUNBP17275 347 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 ST13P50502 369 aaKnown RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 TWF1Q12792 350 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZNF267Q14586 743 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 CCDC85BQ15834 202 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 MBOAT1Q6ZNC8 495 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 OR6K2Q8NGY2 324 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 LRRC20Q8TCA0 184 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 APOL5Q9BWW9 433 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 DCSTAMPQ9H295 470 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 OLA1Q9NTK5 396 aaKnown RBP9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 KLHL20Q9Y2M5 609 aa9.16□□□□□ -0.94
HLA-DOA-201ENST00000229829 OR6C70A6NIJ9 312 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 KDELR3O43731 214 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 CYBAP13498 195 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 PFKLP17858 780 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 SLC9A3P48764 834 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 PPP5CP53041 499 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 ARF5P84085 180 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 GALK2Q01415 458 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 RING1Q06587 406 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 GTF2H3Q13889 308 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 MAPKAPK3Q16644 382 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 HIST2H2ACQ16777 129 aaPredicted RBP9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 SUSD1Q6UWL2 747 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 GCNT7Q6ZNI0 430 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZNF540Q8NDQ6 660 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 OR6Q1Q8NGQ2 317 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 PNPT1Q8TCS8 783 aaKnown RBP9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 SLC47A1Q96FL8 570 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 TXNDC15Q96J42 360 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 FYTTD1Q96QD9 318 aaKnown RBP9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 BARD1Q99728 777 aaKnown RBP9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 ACTR8Q9H981 624 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 GABRQQ9UN88 632 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 PCDHB9Q9Y5E1 797 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 ORC6Q9Y5N6 252 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 PRSS21Q9Y6M0 314 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 AREL1O15033 823 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 MITFO75030 526 aaPredicted RBP9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 UGT2B11O75310 529 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 CD36P16671 472 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 ATF6P18850 670 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 CBLP22681 906 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 IL12RB1P42701 662 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 MAGEA11P43364 429 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 TP53BP2Q13625 1128 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 NXNL2Q5VZ03 156 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 FAM151BQ6UXP7 276 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 SLC16A12Q6ZSM3 486 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 HORMAD1Q86X24 394 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 LIX1Q8N485 282 aa9.15□□□□□ -0.94
HLA-DOA-201ENST00000229829 NETO1Q8TDF5 533 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms