RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CBX6O95503 412 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 TNFP01375 233 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 LINC00032P0C843 101 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 SLC2A4P14672 509 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 ACADLP28330 430 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 MAPK1P28482 360 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 BLKP51451 505 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 CLCNKAP51800 687 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 ERVPABLB-1P60509 514 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 SHC2P98077 582 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 GRIK2Q13002 908 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 TRAF3Q13114 568 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 KLF10Q13118 480 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 CYLC2Q14093 348 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 UBAP2LQ14157 1087 aaKnown RBP16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 UGT3A2Q3SY77 523 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 PYCR3Q53H96 274 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 C6orf163Q5TEZ5 329 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 LARP4Q71RC2 724 aaKnown RBP eCLIP16.28■□□□□ 0.23e-6■■□□□ 11.9
TRAPPC3-210ENST00000617904 SPNS2Q8IVW8 549 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 OR52B6Q8NGF0 335 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 OR56A3Q8NH54 315 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 OR5K2Q8NHB8 316 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 UBE2E3Q969T4 207 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 ATG10Q9H0Y0 220 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 C1orf21Q9H246 121 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 FZD3Q9NPG1 666 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 ARL8BQ9NVJ2 186 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 WSB2Q9NYS7 404 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 SLC22A14Q9Y267 594 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 PRKAB1Q9Y478 270 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 TIMM22Q9Y584 194 aa16.28■□□□□ 0.2
TRAPPC3-210ENST00000617904 PATE3B3GLJ2 98 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 PSMD12O00232 456 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 GDF5P43026 501 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 PFN3P60673 137 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 CTBSQ01459 385 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 C18orf21Q32NC0 220 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 XKR6Q5GH73 641 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 OGFOD2Q6N063 350 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 LETMD1Q6P1Q0 360 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 CHSY3Q70JA7 882 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 MIER2Q8N344 545 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 CADM4Q8NFZ8 388 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 RLN3Q8WXF3 142 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 SH3KBP1Q96B97 665 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 PTCD3Q96EY7 689 aaKnown RBP16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 FERD3LQ96RJ6 166 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 EFCAB11Q9BUY7 163 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 GPR174Q9BXC1 333 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 ZDHHC5Q9C0B5 715 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 AKTIPQ9H8T0 292 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 EIF3LQ9Y262 564 aaKnown RBP16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 BTRCQ9Y297 605 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 TDRKHQ9Y2W6 561 aaKnown RBP16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 PCDHGA11Q9Y5H2 935 aa16.27■□□□□ 0.2
TRAPPC3-210ENST00000617904 TRPM6Q9BX84 2022 aa16.27■□□□□ 0.19
TRAPPC3-210ENST00000617904 PIKFYVEQ9Y2I7 2098 aa16.27■□□□□ 0.19
TRAPPC3-210ENST00000617904 B2RBV5 119 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 KHNYNO15037 678 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 RASGRP1O95267 797 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 SLC16A8O95907 504 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 COX4I1P13073 169 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 NQO1P15559 274 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 ITPKAP23677 461 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 CXCR2P25025 360 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 PIK3R1P27986 724 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 ACADVLP49748 655 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 ERVK-8P63133 956 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 ILF3Q12906 894 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 CHIT1Q13231 466 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 TSTA3Q13630 321 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 NR6A1Q15406 480 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 UAP1L1Q3KQV9 507 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 MMEL1Q495T6 779 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 CACHD1Q5VU97 1274 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 C16orf89Q6UX73 402 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 MBOAT1Q6ZNC8 495 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 RGL4Q8IZJ4 473 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 LILRA3Q8N6C8 439 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 FRMD1Q8N878 549 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 L3MBTL4Q8NA19 623 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 SELENOMQ8WWX9 145 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 SNX19Q92543 992 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 C12orf66Q96MD2 445 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 KCNA7Q96RP8 456 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 SLC25A23Q9BV35 468 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 MRPL1Q9BYD6 325 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 EFCAB1Q9HAE3 211 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 TRNAU1APQ9NX07 287 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 ZNF490Q9ULM2 529 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 G3BP2Q9UN86 482 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 CHD8Q9HCK8 2581 aa16.26■□□□□ 0.19
TRAPPC3-210ENST00000617904 DYTNA2CJ06 578 aa16.25■□□□□ 0.19
TRAPPC3-210ENST00000617904 POM121BA6NF01 834 aa16.25■□□□□ 0.19
TRAPPC3-210ENST00000617904 MANBAO00462 879 aa16.25■□□□□ 0.19
TRAPPC3-210ENST00000617904 PPP6CO00743 305 aa16.25■□□□□ 0.19
TRAPPC3-210ENST00000617904 CDX4O14627 284 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC3-210ENST00000617904 MAP3K13O43283 966 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms