RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GPR180Q86V85 440 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 FOXRED2Q8IWF2 684 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 CFAP206Q8IYR0 622 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 VANGL1Q8TAA9 524 aaPredicted RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 HMGCLL1Q8TB92 370 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 DNAAF4Q8WXU2 420 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 SARAFQ96BY9 339 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 CFAP36Q96G28 342 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 ATG101Q9BSB4 218 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 POLDIP3Q9BY77 421 aaKnown RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 NT5C3AQ9H0P0 336 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 FOXP1Q9H334 677 aaPredicted RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 MAP6D1Q9H9H5 199 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 DNAJC4Q9NNZ3 241 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 ASB6Q9NWX5 421 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 ZNF624Q9P2J8 865 aaPredicted RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 TINAGQ9UJW2 476 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 TSPAN16Q9UKR8 245 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 PADI3Q9ULW8 664 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.77□□□□□ -1.811e-7■■■□□ 14.8
SFSWAP-211ENST00000542813 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 SPATA31E1Q6ZUB1 1445 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 ADGRB2O60241 1585 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 TRPM2O94759 1503 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 EHBP1L1Q8N3D4 1523 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 LRRIQ1Q96JM4 1722 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 A0A0G2JK05 382 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 ILVBLA1L0T0 632 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 GRID2IPA4D2P6 1211 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 J3KR12 359 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 TLR4O00206 839 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 MCF2LO15068 1137 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 HSPA12AO43301 675 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 RIPK2O43353 540 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 LDB2O43679 373 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 SSX5O60225 188 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 ATG13O75143 517 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 APBB3O95704 486 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 CXCL14O95715 111 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 EPCAMP16422 314 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 NR1D1P20393 614 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 MAKP20794 623 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 CCND2P30279 289 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 STX2P32856 288 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 MDH1P40925 334 aaKnown RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 TDO2P48775 406 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 CTSCP53634 463 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 HNRNPH2P55795 449 aaKnown RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 CLDN20P56880 219 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 RIPK4P57078 832 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 GSDMDP57764 484 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 SRP54P61011 504 aaKnown RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 RPS13P62277 151 aaKnown RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 TUBA4AP68366 448 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 ARHGAP1Q07960 439 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 PDE7AQ13946 482 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 DPYSQ14117 519 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 DUSP6Q16828 381 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 CTU2Q2VPK5 515 aaKnown RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 LACTB2Q53H82 288 aaPredicted RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 FASTKD1Q53R41 847 aaKnown RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 TAF1BQ53T94 588 aaPredicted RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 GCNT6Q5T4J0 391 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 OR6B2Q6IFH4 312 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 PRSS55Q6UWB4 352 aaPredicted RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 ZNF517Q6ZMY9 492 aaPredicted RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 MON1BQ7L1V2 547 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 TMPRSS11BQ86T26 416 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 ARHGEF25Q86VW2 580 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 VRK3Q8IV63 474 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 C8orf58Q8NAV2 365 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 SLC44A5Q8NCS7 719 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 KIAA0895Q8NCT3 520 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 ACVR1CQ8NER5 493 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 OR2AK2Q8NG84 335 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 OR5M8Q8NGP6 311 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 PPP4R1Q8TF05 950 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 CKAP2Q8WWK9 683 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 IGFBPL1Q8WX77 278 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 SMPDL3BQ92485 455 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 RND1Q92730 232 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 MTERF3Q96E29 417 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 CDCA5Q96FF9 252 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 EPSTI1Q96J88 318 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 KXD1Q9BQD3 176 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 ZNF559Q9BR84 538 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 DDX47Q9H0S4 455 aaKnown RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 ISCUQ9H1K1 167 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 CARD9Q9H257 536 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 SEMA6AQ9H2E6 1030 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 SNX25Q9H3E2 840 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 SLA2Q9H6Q3 261 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 GPN1Q9HCN4 374 aaPredicted RBP3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 Q9N2K0 584 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 SOHLH2Q9NX45 425 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 NPAP1Q9NZP6 1156 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 EXTL2Q9UBQ6 330 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 KCNN3Q9UGI6 736 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 UBQLN2Q9UHD9 624 aa3.76□□□□□ -1.81
SFSWAP-211ENST00000542813 PLEKHA6Q9Y2H5 1048 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms