RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 SMN1Q16637 294 aaKnown RBP12.1□□□□□ -0.47
NEK6-213ENST00000540326 ATP13A5Q4VNC0 1218 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 LRRC73Q5JTD7 316 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 RNF165Q6ZSG1 346 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 TMEM150AQ86TG1 271 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 SLCO6A1Q86UG4 719 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 ANKRD13BQ86YJ7 626 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 GALNT13Q8IUC8 556 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 BEND7Q8N7W2 519 aaPredicted RBP12.1□□□□□ -0.47
NEK6-213ENST00000540326 ADAMTS19Q8TE59 1207 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 ASIC4Q96FT7 647 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 SH3YL1Q96HL8 342 aaPredicted RBP12.1□□□□□ -0.47
NEK6-213ENST00000540326 C2orf49Q9BVC5 232 aaPredicted RBP12.1□□□□□ -0.47
NEK6-213ENST00000540326 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 PALMDQ9NP74 551 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 AASDHPPTQ9NRN7 309 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 YIPF1Q9Y548 306 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 PCDHGA4Q9Y5G9 962 aa12.1□□□□□ -0.47
NEK6-213ENST00000540326 SCN8AQ9UQD0 1980 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 ANAPC1Q9H1A4 1944 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 CCDC159P0C7I6 412 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 HOXB9P17482 250 aaPredicted RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 ITPKAP23677 461 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 BCAP31P51572 246 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 B4GALNT1Q00973 533 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 PTCHD3Q3KNS1 767 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 GPR33Q49SQ1 333 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 DGKKQ5KSL6 1271 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 LRRC66Q68CR7 880 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 NEK5Q6P3R8 708 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 SHQ1Q6PI26 577 aaKnown RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 FKBP9P1Q75LS8 142 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 VRK3Q8IV63 474 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 RBM12BQ8IXT5 1001 aaKnown RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 OR7A2PQ8NGA2 310 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 CDC26Q8NHZ8 85 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 NDNFQ8TB73 568 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 DPH2Q9BQC3 489 aaPredicted RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 THG1LQ9NWX6 298 aaKnown RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 KCTD5Q9NXV2 234 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 STOML2Q9UJZ1 356 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 INTS6Q9UL03 887 aaKnown RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 SLC22A14Q9Y267 594 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 AP3M1Q9Y2T2 418 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 NAALAD2Q9Y3Q0 740 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 PDE4DIPQ5VU43 2346 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 WNT9AO14904 365 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 PRAMEF4O60810 478 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 ZNF821O75541 412 aaPredicted RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 CCNDBP1O95273 360 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 PORP16435 677 aaPredicted RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 CD6P30203 668 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 MAGEA2P43356 314 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 CLK3P49761 638 aaKnown RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 GSTM4Q03013 218 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 BOP1Q14137 746 aaKnown RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 NPTX1Q15818 432 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 RFX4Q33E94 735 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 PRAMEF9Q5VWM5 478 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 CRTC1Q6UUV9 634 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 DNAJB7Q7Z6W7 309 aaPredicted RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 RORBQ92753 470 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 PANX1Q96RD7 426 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 ZNF347Q96SE7 839 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 ATG10Q9H0Y0 220 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 ATP13A3Q9H7F0 1226 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 TRNAU1APQ9NX07 287 aaKnown RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 VPS4AQ9UN37 437 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 SNX6Q9UNH7 406 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 SAMD4AQ9UPU9 718 aaKnown RBP12.09□□□□□ -0.47
NEK6-213ENST00000540326 CPQQ9Y646 472 aa12.09□□□□□ -0.47
NEK6-213ENST00000540326 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.08□□□□□ -0.48
NEK6-213ENST00000540326 SOBPA7XYQ1 873 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 CLDN25C9JDP6 229 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 GREM1O60565 184 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 PRPS2P11908 318 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 KIR3DL1P43629 444 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 STK19P49842 368 aaPredicted RBP12.08□□□□□ -0.48
NEK6-213ENST00000540326 RAB15P59190 212 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 VBP1P61758 197 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 VLDLRP98155 873 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 OCA2Q04671 838 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 GBX1Q14549 363 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 SF1Q15637 639 aaKnown RBP12.08□□□□□ -0.48
NEK6-213ENST00000540326 ADPRMQ3LIE5 342 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 ZC3H12BQ5HYM0 836 aaKnown RBP12.08□□□□□ -0.48
NEK6-213ENST00000540326 PERM1Q5SV97 790 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 LYPLAL1Q5VWZ2 237 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 OR2T5Q6IEZ7 315 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 ZNF621Q6ZSS3 439 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 OR2T29Q8NH02 315 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 DNAJB8Q8NHS0 232 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 UBE2FQ969M7 185 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 COPS8Q99627 209 aa12.08□□□□□ -0.48
NEK6-213ENST00000540326 TMEM175Q9BSA9 504 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms