RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SLC24A4Q8NFF2 622 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 OLIG1Q8TAK6 271 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 ST6GALNAC6Q969X2 333 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 STAMBPL1Q96FJ0 436 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 PGLYRP2Q96PD5 576 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 GTPBP2Q9BX10 602 aaKnown RBP4.23□□□□□ -1.73
C11orf88-204ENST00000529661 MRPL9Q9BYD2 267 aaKnown RBP4.23□□□□□ -1.73
C11orf88-204ENST00000529661 TMEM206Q9H813 350 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 Q9H8V8 135 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 LMAN1LQ9HAT1 526 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 TRPV4Q9HBA0 871 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 SLC38A7Q9NVC3 462 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 COQ3Q9NZJ6 369 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 ARMCX3Q9UH62 379 aaPredicted RBP4.23□□□□□ -1.73
C11orf88-204ENST00000529661 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 CASTOR2A6NHX0 329 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 ATP6AP2O75787 350 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 LUC7L3O95232 432 aaKnown RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 SPP1P10451 314 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 HAPLN1P10915 354 aaPredicted RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 HSPA8P11142 646 aaKnown RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 CDX1P47902 265 aaPredicted RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 ALDH3A2P51648 485 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 NPTX1Q15818 432 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 LACTB2Q53H82 288 aaPredicted RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 ODF2Q5BJF6 829 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 ZNF449Q6P9G9 518 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 ZNF852Q6ZMS4 543 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 NRARPQ7Z6K4 114 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 NFE4Q86UQ8 179 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 HOOK3Q86VS8 718 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 DZIP1Q86YF9 867 aaKnown RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 PLD3Q8IV08 490 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 TUSC5Q8IXB3 177 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 KLHL7Q8IXQ5 586 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 CCDC170Q8IYT3 715 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 CARNMT1Q8N4J0 409 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 VANGL1Q8TAA9 524 aaPredicted RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 HSD17B8Q92506 261 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 EXOC4Q96A65 974 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 SCRN2Q96FV2 425 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 MYADMQ96S97 322 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 RTP3Q9BQQ7 232 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 SLC2A11Q9BYW1 496 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 MMADHCQ9H3L0 296 aaPredicted RBP4.22□□□□□ -1.73
C11orf88-204ENST00000529661 MINDY3Q9H8M7 445 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 OLFML3Q9NRN5 406 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 SEPT10Q9P0V9 454 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 TXNDC16Q9P2K2 825 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 ITGA11Q9UKX5 1188 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 WDR83OSQ9Y284 106 aa4.22□□□□□ -1.73
C11orf88-204ENST00000529661 TRAV24A0A0B4J272 114 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 DUXAA6NLW8 204 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ERVV-2B6SEH9 535 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ZNF263O14978 683 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 SELENOFO60613 162 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 FCGR3BO75015 233 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 BAG2O95816 211 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 RLN1P04808 185 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 NR1D1P20393 614 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 MSH3P20585 1137 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ANOS1P23352 680 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 PSMB4P28070 264 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 SOAT1P35610 550 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 KCNJ1P48048 391 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 HOXA1P49639 335 aaPredicted RBP4.21□□□□□ -1.74
C11orf88-204ENST00000529661 MTCP1P56278 107 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 GSDMDP57764 484 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 DMPKQ09013 629 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ZNF415Q09FC8 603 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 C17orf67Q0P5P2 114 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 MORF4L2Q15014 288 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 TAZQ16635 292 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 SMU1Q2TAY7 513 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ITPRIPL2Q3MIP1 535 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 PHLDA2Q53GA4 152 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 LRRC73Q5JTD7 316 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 SIRPB2Q5JXA9 342 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 GLRA4Q5JXX5 417 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 SPDYCQ5MJ68 293 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ELFN2Q5R3F8 820 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 TXNRD3NBQ6F5E7 133 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 CORO6Q6QEF8 472 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 NHLRC1Q6VVB1 395 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 GET4Q7L5D6 327 aaPredicted RBP4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ZNF554Q86TJ5 538 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 CREBRFQ8IUR6 639 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 C4orf19Q8IY42 314 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 CFAP206Q8IYR0 622 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 OR7G3Q8NG95 312 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 GRHL3Q8TE85 626 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 PROX1Q92786 737 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ALG14Q96F25 216 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 ZBTB20Q9HC78 741 aaPredicted RBP4.21□□□□□ -1.74
C11orf88-204ENST00000529661 GSN-AS1Q9NRJ2 163 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 GKN1Q9NS71 199 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 SPHK1Q9NYA1 384 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 PTTG2Q9NZH5 202 aa4.21□□□□□ -1.74
C11orf88-204ENST00000529661 MTRRQ9UBK8 725 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms