RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 C4orf22Q6V702 233 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 KRT222Q8N1A0 295 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 C2orf73Q8N5S3 287 aaPredicted RBP13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 RNF10Q8N5U6 811 aaKnown RBP13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 MAGEC3Q8TD91 643 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 FOPNLQ96NB1 174 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ZBTB20Q9HC78 741 aaPredicted RBP13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 EIF2B3Q9NR50 452 aaKnown RBP13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 SPATA7Q9P0W8 599 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 MARCH4Q9P2E8 410 aaPredicted RBP13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 CTSFQ9UBX1 484 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 NTNG1Q9Y2I2 539 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 CAPN6Q9Y6Q1 641 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ITPR2Q14571 2701 aa13.98□□□□□ -0.17
SCARNA20.5-201ENST00000516991 MDC1Q14676 2089 aaKnown RBP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 DIDO1Q9BTC0 2240 aaKnown RBP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 NBPF19A0A087WUL8 3843 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 VSTM2BA6NLU5 285 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 MASP2O00187 686 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 CD3EAPO15446 510 aaKnown RBP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 PRICKLE3O43900 615 aaPredicted RBP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 NDUFS3O75489 264 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 CLDN1O95832 211 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 RPS3P23396 243 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 MCM3P25205 808 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 GRIA3P42263 894 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 PER3P56645 1201 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 HIF1AQ16665 826 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 KIRREL2Q6UWL6 708 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 OTOAQ7RTW8 1153 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 SLC13A5Q86YT5 568 aaPredicted RBP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 TMEM139Q8IV31 216 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 SKA2Q8WVK7 121 aaPredicted RBP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 DESI2Q9BSY9 194 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 CRB3Q9BUF7 120 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 IL22Q9GZX6 179 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 P2RY12Q9H244 342 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 SOX17Q9H6I2 414 aaPredicted RBP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 CIDEBQ9UHD4 219 aa13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 TTC7AQ9ULT0 858 aaPredicted RBP13.97□□□□□ -0.17
SCARNA20.5-201ENST00000516991 HYKKA2RU49 373 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 H3BMM5 538 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 MAP2K7O14733 419 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 PFDN6O15212 129 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 PRPF4O43172 522 aaKnown RBP eCLIP13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 CTSVO60911 334 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 PHF2O75151 1096 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 C1orf105O95561 183 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 HPP00738 406 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ERVK-10P10266 1014 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ACPPP15309 386 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ATP5DP30049 168 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 DCTP40126 519 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 BDKRB1P46663 353 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 VSX2P58304 361 aaPredicted RBP13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 OCA2Q04671 838 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ZNF169Q14929 603 aaPredicted RBP13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 TLR1Q15399 786 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 MUM1Q2TAK8 710 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 RNF187Q5TA31 235 aaPredicted RBP13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ISLR2Q6UXK2 745 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 RNF44Q7L0R7 432 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 LDB1Q86U70 411 aaPredicted RBP13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 TMEM151BQ8IW70 566 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 OR2L3Q8NG85 312 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 OR11G2Q8NGC1 345 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 C1orf54Q8WWF1 131 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 MIPEPQ99797 713 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 TSGA10Q9BZW7 698 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ZNF304Q9HCX3 659 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 CHRAC1Q9NRG0 131 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 TREX1Q9NSU2 369 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ZNF282Q9UDV7 671 aaPredicted RBP13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 SVILO95425 2214 aa13.96□□□□□ -0.17
SCARNA20.5-201ENST00000516991 ALOX12BO75342 701 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 EDN3P14138 238 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 FDXRP22570 491 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 PSMB5P28074 263 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 CMPK1P30085 196 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 OR1D4P47884 311 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 EMP3P54852 163 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 EIF3BP55884 814 aaKnown RBP13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 SESN2P58004 480 aaPredicted RBP13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 CDC16Q13042 620 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 MFAP5Q13361 173 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 SNX1Q13596 522 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 WASHC2DQ5SRD0 308 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 ZNF787Q6DD87 383 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 MRNIPQ6NTE8 343 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 SHISA6Q6ZSJ9 500 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 KCNMB4Q86W47 210 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 PARP9Q8IXQ6 854 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 METTL27Q8N6F8 245 aaPredicted RBP13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 OTUD6BQ8N6M0 293 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 DNAJB14Q8TBM8 379 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 MIEF2Q96C03 454 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 THOC3Q96J01 351 aaKnown RBP13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 CNDP1Q96KN2 507 aa13.95□□□□□ -0.18
SCARNA20.5-201ENST00000516991 LMF1Q96S06 567 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms