RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 FLRT3Q9NZU0 649 aa3.11□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZNF624Q9P2J8 865 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC11-207ENST00000511409 KCNJ14Q9UNX9 436 aa3.11□□□□□ -1.91
TRAPPC11-207ENST00000511409 TNNQ9UQP3 1299 aa3.11□□□□□ -1.91
TRAPPC11-207ENST00000511409 C2CD2Q9Y426 696 aa3.11□□□□□ -1.91
TRAPPC11-207ENST00000511409 TRIM17Q9Y577 477 aa3.11□□□□□ -1.91
TRAPPC11-207ENST00000511409 STK36Q9NRP7 1315 aa3.11□□□□□ -1.91
TRAPPC11-207ENST00000511409 IGHV4-61A0A0C4DH41 118 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 A0A1W2PPK0 400 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 HTR3EA5X5Y0 456 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 FAM86B1E9PN63 330 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 BLOC1S5-TXNDC5H3BN57 136 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 CCDC188H7C350 402 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 PSMA7O14818 248 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 SLC22A2O15244 555 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 PCDH7O60245 1069 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 SNX3O60493 162 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 TRMUO75648 421 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 SLU7O95391 586 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 IGHV4-59P01825 116 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 FAM86B2P0C5J1 330 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 FRMD6-AS1P0C7T7 363 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 STAG3L1P0CL83 205 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 DARSP14868 501 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 TCF4P15884 667 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 ITGA3P26006 1051 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 HOXC8P31273 242 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 MAP2K2P36507 400 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 MAZP56270 477 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 MTCP1P56278 107 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 GSDMDP57764 484 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 ILF2Q12905 390 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 PTK6Q13882 451 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 SCARB2Q14108 478 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 UGCGQ16739 394 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 KIAA1644Q3SXP7 199 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 ALDH1L2Q3SY69 923 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 LACTB2Q53H82 288 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 SLC35D3Q5M8T2 416 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 SHEQ5VZ18 495 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 FAM91A1Q658Y4 838 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 SLC16A9Q7RTY1 509 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 ANKRD23Q86SG2 305 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 CUZD1Q86UP6 607 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 KLHL7Q8IXQ5 586 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 SIX6OS1Q8N1H7 587 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 RASGEF1AQ8N9B8 481 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 OR52N5Q8NH56 324 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 GOT1L1Q8NHS2 421 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 HEXDCQ8WVB3 486 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 FAM162AQ96A26 154 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 ZNF524Q96C55 264 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 FBXO17Q96EF6 278 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 INTS14Q96SY0 518 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 CCDC3Q9BQI4 270 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 TRPV4Q9HBA0 871 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 PPANQ9NQ55 473 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 GSN-AS1Q9NRJ2 163 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 INTS9Q9NV88 658 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 RASAL2Q9UJF2 1139 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 TCF19Q9Y242 345 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 CNTNAP2Q9UHC6 1331 aa3.1□□□□□ -1.91
TRAPPC11-207ENST00000511409 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 ATP6AP2O75787 350 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 DDHD2O94830 711 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 PGLSO95336 258 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 HMBSP08397 361 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 FAM58BPP0C7Q3 252 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 IGHV4-31P0DP07 118 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 SPP1P10451 314 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 LHCGRP22888 699 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 CD27P26842 260 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 CHRNB4P30926 498 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 WNT5AP41221 380 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 RGS7P49802 495 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 ALDH3A2P51648 485 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 VAMP7P51809 220 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 LBX1P52954 281 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 HERV-K104P61576 105 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 GCNT1Q02742 428 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 RASGEF1BQ0VAM2 473 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 HERC3Q15034 1050 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 CTU2Q2VPK5 515 aaKnown RBP3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 XKR3Q5GH77 459 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 MPP7Q5T2T1 576 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 LCN1P1Q5VSP4 162 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 OR4A47Q6IF82 309 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 MEX3BQ6ZN04 569 aaKnown RBP3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 NRARPQ7Z6K4 114 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 AMIGO1Q86WK6 493 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 TIGD4Q8IY51 512 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 OR10Q1Q8NGQ4 319 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 DNASE2BQ8WZ79 361 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 SUSD6Q92537 303 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 ST6GALNAC6Q969X2 333 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 GIMAP5Q96F15 307 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 PGM2Q96G03 612 aa3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 BSCL2Q96G97 398 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-207ENST00000511409 JAKMIP1Q96N16 626 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms