RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 BLMHQ13867 455 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 ZNF234Q14588 700 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 INPP5AQ14642 412 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 PTCHD3Q3KNS1 767 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 C9orf50Q5SZB4 431 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 C10orf62Q5T681 223 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 IL23RQ5VWK5 629 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 LCN8Q6JVE9 175 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 SERPINA13PQ6UXR4 307 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 RNF111Q6ZNA4 994 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 ERN2Q76MJ5 926 aaKnown RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 GET4Q7L5D6 327 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 PTRH1Q86Y79 214 aaKnown RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 SLC15A3Q8IY34 581 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 YAF2Q8IY57 180 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 SLC22A15Q8IZD6 547 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 AADATQ8N5Z0 425 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 RNF148Q8N7C7 305 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 MYLIPQ8WY64 445 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 SUSD6Q92537 303 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 N4BP2L2Q92802 583 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 POP5Q969H6 163 aaKnown RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 NUS1Q96E22 293 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 LINC00615Q96LM1 132 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 Q9H521 79 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 ELOVL6Q9H5J4 265 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 LRTM1Q9HBL6 345 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 HPS4Q9NQG7 708 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 C1orf109Q9NX04 203 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 ACTR3BQ9P1U1 418 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 THAP10Q9P2Z0 257 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 KLQ9UEF7 1012 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 GPN3Q9UHW5 284 aaPredicted RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 MSRAQ9UJ68 235 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 RIMS3Q9UJD0 308 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 GPR34Q9UPC5 381 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 YBX2Q9Y2T7 364 aaKnown RBP7.29□□□□□ -1.24
CXCR4-202ENST00000409817 RNF11Q9Y3C5 154 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 AP4S1Q9Y587 144 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 PCDHA9Q9Y5H5 950 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 KIAA1549LQ6ZVL6 1849 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 C2orf16Q68DN1 1984 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 BPTFQ12830 3046 aa7.29□□□□□ -1.24
CXCR4-202ENST00000409817 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 KLHL33A6NCF5 533 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TBC1D3BA6NDS4 549 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 NME4O00746 187 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TSPAN6O43657 245 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 VEGFDO43915 354 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SMNDC1O75940 238 aaKnown RBP eCLIP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ARAFP10398 606 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 UMPSP11172 480 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 G6PDP11413 515 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 HSD3B1P14060 373 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SLC2A4P14672 509 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 JUPP14923 745 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TCN1P20061 433 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 HSD3B2P26439 372 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 GRIA2P42262 883 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SLC6A11P48066 632 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 NME5P56597 212 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 GTF2H3Q13889 308 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MAP7Q14244 749 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SHHQ15465 462 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 FXNQ16595 210 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 RFTN2Q52LD8 501 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 C6orf10Q5SRN2 563 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 FAM109BQ6ICB4 259 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SCIMPQ6UWF3 145 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 LAYNQ6UX15 382 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 DENND4AQ7Z401 1863 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 HID1Q8IV36 788 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 VRK3Q8IV63 474 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 KBTBD2Q8IY47 623 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 DCBLD1Q8N8Z6 715 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 RASGEF1AQ8N9B8 481 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SNX31Q8N9S9 440 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ICA1LQ8NDH6 482 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 OR8J3Q8NGG0 315 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 OR2T34Q8NGX1 318 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 OR2T3Q8NH03 318 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 NAT14Q8WUY8 206 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SELENOMQ8WWX9 145 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TMEM125Q96AQ2 219 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ARRDC3Q96B67 414 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MRPL38Q96DV4 380 aaKnown RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 CMTM7Q96FZ5 175 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 UHRF1Q96T88 793 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SH3GL1Q99961 368 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 P2RY13Q9BPV8 354 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 C1orf50Q9BV19 199 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ADAM19Q9H013 955 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MTG2Q9H4K7 406 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ARMC1Q9NVT9 282 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 GPRC5BQ9NZH0 403 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 PACSIN3Q9UKS6 424 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MAPRE3Q9UPY8 281 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 DTNAQ9Y4J8 743 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms