RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 GAL3ST1Q99999 423 aa11.8□□□□□ -0.52
SMCR8-201ENST00000406438 ERVK-6Q9BXR3 956 aa11.8□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF69Q9UC07 566 aa11.8□□□□□ -0.52
SMCR8-201ENST00000406438 TLR6Q9Y2C9 796 aa11.8□□□□□ -0.52
SMCR8-201ENST00000406438 A0A1B0GVC2 190 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 PIP5K1BO14986 540 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 KLRC4O43908 158 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 RAB36O95755 333 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 SCGB1D2O95969 90 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 GPR68Q15743 365 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 GRIK5Q16478 980 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 TNFAIP8L2Q6P589 184 aaPredicted RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF101Q8IZC7 436 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ABCD2Q9UBJ2 740 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 CYTH4Q9UIA0 394 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 OR4Q2P0C623 313 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 DNAJA1P31689 397 aaKnown RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 PRKCDQ05655 676 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 SNTA1Q13424 505 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ELOAQ14241 798 aaKnown RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF227Q86WZ6 799 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 TOP1MTQ969P6 601 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 KREMEN1Q96MU8 473 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 XRN1Q8IZH2 1706 aaKnown RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 SPAG17Q6Q759 2223 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 GRXCR2A6NFK2 248 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 K7EPI3 171 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 GNB5O14775 395 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 KLK3P07288 261 aaPredicted RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ECM1Q16610 540 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 MIPEPQ99797 713 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ARHGAP9Q9BRR9 750 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 DUSP26Q9BV47 211 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 FLRT1Q9NZU1 646 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 PRDM4Q9UKN5 801 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 NOBOXO60393 691 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 TSPAN1O60635 241 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ITGB1P05556 798 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 C8AP07357 584 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 CBLBQ13191 982 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ADAM15Q13444 863 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 SCARB2Q14108 478 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 LRRC32Q14392 662 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 CLEC12AQ5QGZ9 265 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 MBOAT1Q6ZNC8 495 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 OR7D4Q8NG98 312 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 HMGB4Q8WW32 186 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 HPF1Q9NWY4 346 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 AZGP1P25311 298 aaKnown RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 BNIP1Q12981 228 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ARSIQ5FYB1 569 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 TSTD2Q5T7W7 516 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 CAMKVQ8NCB2 501 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 POLR2J2Q9GZM3 115 aaKnown RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 SEC61A2Q9H9S3 476 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 SPIN1Q9Y657 262 aaPredicted RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 TSPAN4O14817 238 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ATRNO75882 1429 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 MYOM1P52179 1685 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF460Q14592 562 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 PLA2G15Q8NCC3 412 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 WFIKKN2Q8TEU8 576 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 TCEAL3Q969E4 200 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF350Q9GZX5 532 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 WDR26Q9H7D7 661 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ITM2CQ9NQX7 267 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 PCP4L1A6NKN8 68 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 PCDHGA12O60330 932 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 CLEC3AO75596 197 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 C15orf52Q6ZUT6 534 aaKnown RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 DNAAF1Q8NEP3 725 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 KLK6Q92876 244 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 TRMT61BQ9BVS5 477 aaKnown RBP11.79□□□□□ -0.52
SMCR8-201ENST00000406438 TRPV4Q9HBA0 871 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 RDH8Q9NYR8 311 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 KLRF1Q9NZS2 232 aa11.79□□□□□ -0.52
SMCR8-201ENST00000406438 ATF4P18848 351 aaPredicted RBP11.78□□□□□ -0.52
SMCR8-201ENST00000406438 SMSP52788 366 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 PER3P56645 1201 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 ENPP7Q6UWV6 458 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 GDPD4Q6W3E5 623 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 ADAD1Q96M93 576 aaKnown RBP11.78□□□□□ -0.52
SMCR8-201ENST00000406438 OR4F21O95013 312 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 RHBDL3P58872 404 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 ADAM17P78536 824 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 RIN1Q13671 783 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 GANABQ14697 944 aaKnown RBP11.78□□□□□ -0.52
SMCR8-201ENST00000406438 ZSCAN4Q8NAM6 433 aaPredicted RBP11.78□□□□□ -0.52
SMCR8-201ENST00000406438 CD99L2Q8TCZ2 262 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 DQX1Q8TE96 717 aaKnown RBP11.78□□□□□ -0.52
SMCR8-201ENST00000406438 LRTOMTQ8WZ04 291 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 MFSD3Q96ES6 412 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 SNX27Q96L92 541 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 ORAI3Q9BRQ5 295 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 POLR2J3Q9H1A7 115 aaKnown RBP11.78□□□□□ -0.52
SMCR8-201ENST00000406438 ROBO1Q9Y6N7 1651 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
SMCR8-201ENST00000406438 NEMP2A6NFY4 417 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms