RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HHIPL1Q96JK4 782 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 G6PC3Q9BUM1 346 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 QRSL1Q9H0R6 528 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TMEM38AQ9H6F2 299 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 BCS1LQ9Y276 419 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 A0A0G2JPF8 293 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 HNRNPCL3B7ZW38 293 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 HNRNPCL4P0DMR1 293 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 MANFP55145 182 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 NADK2Q4G0N4 442 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CCDC58Q4VC31 144 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ALG1LQ6GMV1 187 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SLC15A3Q8IY34 581 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ZBTB2Q8N680 514 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 GANCQ8TET4 914 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ACSS2Q9NR19 701 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FAM86C1Q9NVL1 165 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ATP6AP2O75787 350 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PADI2Q9Y2J8 665 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PCDH17O14917 1159 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FAM20BO75063 409 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 INMTO95050 263 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CTBSQ01459 385 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PPP1R3AQ16821 1122 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 DPY19L2P1Q6NXN4 242 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 USP30Q70CQ3 517 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TRIM74Q86UV6 250 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TRIM73Q86UV7 250 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FIG4Q92562 907 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 VPS35Q96QK1 796 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 B3GALNT1O75752 331 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PPP2R2BQ00005 443 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 C16orf62Q7Z3J2 963 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF527Q8NB42 609 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ELMO1Q92556 727 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TRMT2BQ96GJ1 504 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 GPRC5CQ9NQ84 441 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CCRL2O00421 344 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TFAP2AP05549 437 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 XKP51811 444 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RGS1Q08116 209 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ILKQ13418 452 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TGFBIQ15582 683 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RSBN1Q5VWQ0 802 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PLAG1Q6DJT9 500 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 DNAJB14Q8TBM8 379 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TMEM80Q96HE8 168 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CD300AQ9UGN4 299 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 DNAJC25-GNG10A0A024R161 153 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TNFRSF11BO00300 401 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 UQCRC2P22695 453 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ADORA2AP29274 412 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ZFP42Q96MM3 310 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 KCNC2Q96PR1 638 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 LMAN2LQ9H0V9 348 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 XPNPEP2O43895 674 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 HNRNPA1P09651 372 aaKnown RBP eCLIP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CSF2RAP15509 400 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF26P17031 533 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TXNDC5Q8NBS9 432 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 NELL1Q92832 810 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 BIRC7Q96CA5 298 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 OARD1Q9Y530 152 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CD81P60033 236 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TOMM20Q15388 145 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PPP1R26Q5T8A7 1209 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 EGFLAMQ63HQ2 1017 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SLCO6A1Q86UG4 719 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PXYLP1Q8TE99 480 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FCRL3Q96P31 734 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ASB6Q9NWX5 421 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 MEMO1Q9Y316 297 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 XRN1Q8IZH2 1706 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FAM170BA6NMN3 283 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CDK4P11802 303 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RPP38P78345 283 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 EFR3AQ14156 821 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CERS5Q8N5B7 392 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TRAV19A0A0A6YYK7 116 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 KRT33AO76009 404 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 NOS3P29474 1203 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 GBX2P52951 348 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 GCNT7Q6ZNI0 430 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 DCAF4L2Q8NA75 395 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 OR13J1Q8NGT2 312 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TTC9Q92623 222 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ULBP1Q9BZM6 244 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SEC14L2O76054 403 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 POU1F1P28069 291 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SPHARQ15513 63 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 GPAT3Q53EU6 434 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FAM183BPQ6ZVS7 135 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TAS2R9Q9NYW1 312 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RIIAD1A6NNX1 92 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TREHO43280 583 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RECQL4O94761 1208 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 OGDHQ02218 1023 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 WDR88Q6ZMY6 472 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CAMKMTQ7Z624 323 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RPS6KB2Q9UBS0 482 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms