RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TUSC3Q13454 348 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 GNA13Q14344 377 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM117BQ6P1L5 589 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZFP90Q8TF47 636 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 TMEM203Q969S6 136 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZNF486Q96H40 463 aaPredicted RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 HSH2DQ96JZ2 352 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAGEH1Q9H213 219 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRKAB1Q9Y478 270 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 J3KR12 359 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 PTTG1O95997 202 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRLP01236 227 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 LRG1P02750 347 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 OXTRP30559 389 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 CSTF2P33240 577 aaKnown RBP eCLIP12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 NR4A2P43354 598 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 ALDH3B2P48448 385 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 AGTR2P50052 363 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 STC1P52823 247 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 FBXW4P57775 412 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 NAE1Q13564 534 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 TARBP2Q15633 366 aaKnown RBP12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 TP53INP2Q8IXH6 220 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 SPARTQ8N0X7 666 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZNF675Q8TD23 568 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 UFD1Q92890 307 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 SIPA1Q96FS4 1042 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 CORO1BQ9BR76 489 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 RNF11Q9Y3C5 154 aa12.83□□□□□ -0.35
PCDHGB3-201ENST00000576222 MYO5AQ9Y4I1 1855 aaKnown RBP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 AP3D1O14617 1153 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 GUCY1B2O75343 617 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 CD1DP15813 335 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 SH3BP2P78314 561 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 TGM3Q08188 693 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 GALNT1Q10472 559 aaPredicted RBP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 KCNJ8Q15842 424 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 PRAMEF19Q5SWL8 479 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 TMEM174Q8WUU8 243 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 KLHL6Q8WZ60 621 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 NFKBIZQ9BYH8 718 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 POLR2J3Q9H1A7 115 aaKnown RBP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF510Q9Y2H8 683 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 CHD4Q14839 1912 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 CDRT1O95170 752 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 OPN1SWP03999 348 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 ATF6P18850 670 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 IL4RP24394 825 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF717Q9BY31 904 aaPredicted RBP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 OSGEPL1Q9H4B0 414 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 COMMD9Q9P000 198 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 AKAP7Q9P0M2 348 aaPredicted RBP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 ENPP5Q9UJA9 477 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 GRIP1Q9Y3R0 1128 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 NUAK1O60285 661 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 NME6O75414 186 aaPredicted RBP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 TAS2R41P59536 307 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 GANABQ14697 944 aaKnown RBP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 DUSP28Q4G0W2 176 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 GOLGA7Q7Z5G4 137 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 SYVN1Q86TM6 617 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 XAGE5Q8WWM1 108 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 BEX2Q9BXY8 128 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 SPACA6W5XKT8 324 aa12.83□□□□□ -0.36
PCDHGB3-201ENST00000576222 CNTN5O94779 1100 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 FUT4P22083 530 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 HNRNPFP52597 415 aaKnown RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 RPP38P78345 283 aaKnown RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 ST3GAL4Q11206 333 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 ATAD1Q8NBU5 361 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 RHEBL1Q8TAI7 183 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 POF1BQ8WVV4 589 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF599Q96NL3 588 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 ASPNQ9BXN1 380 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 EIF3KQ9UBQ5 218 aaKnown RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF282Q9UDV7 671 aaPredicted RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 FZD4Q9ULV1 537 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 QSOX1O00391 747 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 OR5F1O95221 314 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 IFNA7P01567 189 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 FYNP06241 537 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 MMP3P08254 477 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 SLC6A4P31645 630 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 PLD1Q13393 1074 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 KLHL22Q53GT1 634 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 SETMARQ53H47 684 aaPredicted RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 LIN54Q6MZP7 749 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 LINGO4Q6UY18 593 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 TPGS1Q6ZTW0 290 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 CTU1Q7Z7A3 348 aaKnown RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 TMPRSS11BQ86T26 416 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 ACDQ96AP0 544 aa12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 RPL10LQ96L21 214 aaKnown RBP12.82□□□□□ -0.36
PCDHGB3-201ENST00000576222 TSGA13Q96PP4 275 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms