RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CYP4F2P78329 520 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 EMX1Q04741 257 aaPredicted RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 CYP4F3Q08477 520 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 ZNF534Q76KX8 674 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 RTL10Q7L3V2 364 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 SLC26A9Q7LBE3 791 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 ZNF438Q7Z4V0 828 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 KRT73Q86Y46 540 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 RGL4Q8IZJ4 473 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 PSD4Q8NDX1 1056 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 CHDHQ8NE62 594 aaPredicted RBP8.5□□□□□ -1.05
DDB1-217ENST00000540166 GTF2H4Q92759 462 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 KCNS3Q9BQ31 491 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 GON7Q9BXV9 100 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 DPEP3Q9H4B8 488 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 ALG9Q9H6U8 611 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 LMAN1LQ9HAT1 526 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 DNAJB9Q9UBS3 223 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 POLHQ9Y253 713 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 PCDHGB6Q9Y5F9 930 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 LOXHD1Q8IVV2 1947 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 SCN5AQ14524 2016 aa8.5□□□□□ -1.05
DDB1-217ENST00000540166 ARPC4-TTLL3A0A0A6YYG9 625 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 A0A1W2PRG6 482 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 FADS2P1A8MWK0 482 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 F8W810 466 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 OR2B3O76000 313 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 CYP11A1P05108 521 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 CCNYL3P0C7X3 344 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 LINC00032P0C843 101 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 ERP29P30040 261 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 CTSKP43235 329 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 MAGEA6P43360 314 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 PRIM2P49643 509 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 ADARB1P78563 741 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 DSC1Q08554 894 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 MLF2Q15773 248 aaPredicted RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 RBBP7Q16576 425 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 UPP1Q16831 310 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 BTBD16Q32M84 506 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 RNF219Q5W0B1 726 aaPredicted RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 RPS27LQ71UM5 84 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 HIPK1Q86Z02 1210 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 UBE2J2Q8N2K1 259 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 HEXDCQ8WVB3 486 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 SGCDQ92629 289 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 TMEM74Q96NL1 305 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 FCRL3Q96P31 734 aaPredicted RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 TRNT1Q96Q11 434 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 WDCPQ9H6R7 721 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 AKTIPQ9H8T0 292 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 TRIM45Q9H8W5 580 aaPredicted RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 ACTR8Q9H981 624 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 PTGESO14684 152 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 AZIN1O14977 448 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 HCRTO43612 131 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 FKBP9O95302 570 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 NFATC1O95644 943 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 RPLP0P05388 317 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 LTA4HP09960 611 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 BDNFP23560 247 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 NMBRP28336 390 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 CXCL12P48061 93 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 FOXD4Q12950 439 aaPredicted RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 CSTF3Q12996 717 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 IL18R1Q13478 541 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 SDHAF4Q5VUM1 108 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 IDO2Q6ZQW0 420 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 LUZP2Q86TE4 346 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 SVOPLQ8N434 492 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 MINDY1Q8N5J2 469 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 SLC47A1Q96FL8 570 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 CLSTN3Q9BQT9 956 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 CLPBQ9H078 707 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 GKN1Q9NS71 199 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 HCFC1R1Q9NWW0 138 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 MARCH5Q9NX47 278 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 WNT16Q9UBV4 365 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 ADGRE2Q9UHX3 823 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 FBXW11Q9UKB1 542 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 TPRP12270 2363 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 HEPACAM2A8MVW5 462 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 ZNF682O95780 498 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 MOCS2O96007 188 aaPredicted RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 CAPNS1P04632 268 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 IFNA16P05015 189 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 CES1P23141 567 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 NOS2P35228 1153 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 TKTL1P51854 596 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 SNRPD2P62316 118 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 CYP4F8P98187 520 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 GPR17Q13304 367 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 C10orf120Q5SQS8 335 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 GTF2IRD2BQ6EKJ0 949 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 SULT1C3Q6IMI6 304 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 TMPRSS11AQ6ZMR5 421 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 ZNF767PQ75MW2 155 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 STRADAQ7RTN6 431 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 GTF2IRD2Q86UP8 949 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 GPR65Q8IYL9 337 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms