RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 HMGCLL1Q8TB92 370 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 TSPEARQ8WU66 669 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 TRIT1Q9H3H1 467 aaKnown RBP13.78□□□□□ -0.2
CHEK1-210ENST00000528276 RNPEPL1Q9HAU8 725 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 CCDC177Q9NQR7 707 aaPredicted RBP13.78□□□□□ -0.2
CHEK1-210ENST00000528276 SLC2A4RGQ9NR83 387 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 TM7SF3Q9NS93 570 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 C1orf109Q9NX04 203 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 GPRC5BQ9NZH0 403 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 SLC23A2Q9UGH3 650 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 DYTNA2CJ06 578 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 E7EQ34 232 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 PI15O43692 258 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 G6PDP11413 515 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 RPL10P27635 214 aaKnown RBP13.78□□□□□ -0.2
CHEK1-210ENST00000528276 MAPK1P28482 360 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 IGFALSP35858 605 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 HSD17B2P37059 387 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 CASP2P42575 452 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 MRPL19P49406 292 aaKnown RBP13.78□□□□□ -0.2
CHEK1-210ENST00000528276 CLCNKAP51800 687 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 NEK2P51955 445 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
CHEK1-210ENST00000528276 PNLIPRP1P54315 467 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 UFM1P61960 85 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 TBPL1P62380 186 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 PPP2CBP62714 309 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 PPP2CAP67775 309 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 PGM2L1Q6PCE3 622 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 CYP20A1Q6UW02 462 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 FAM9CQ8IZT9 166 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 PHC3Q8NDX5 983 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 REPS1Q96D71 796 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 ZDHHC5Q9C0B5 715 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 SGK2Q9HBY8 427 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 SPAG4Q9NPE6 437 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 PCDHGA11Q9Y5H2 935 aa13.78□□□□□ -0.2
CHEK1-210ENST00000528276 PCYT1BQ9Y5K3 369 aaPredicted RBP13.78□□□□□ -0.2
CHEK1-210ENST00000528276 SPTBN5Q9NRC6 3674 aaKnown RBP13.77□□□□□ -0.2
CHEK1-210ENST00000528276 A0A1W2PP18 115 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 FAM234BA2RU67 622 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 C9JVG2 144 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 FBP2O00757 339 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 RSL1D1O76021 490 aaKnown RBP13.77□□□□□ -0.21
CHEK1-210ENST00000528276 STAMBPO95630 424 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 ME2P23368 584 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 DGKEP52429 567 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 AP2B1P63010 937 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 ZNF33BQ06732 778 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 LRP8Q14114 963 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 DOC2AQ14183 400 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
CHEK1-210ENST00000528276 HIST2H2ACQ16777 129 aaPredicted RBP13.77□□□□□ -0.21
CHEK1-210ENST00000528276 COQ5Q5HYK3 327 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 PAGE2BQ5JRK9 111 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 HIST2H2AA3Q6FI13 130 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 PTCRAQ6ISU1 281 aaPredicted RBP13.77□□□□□ -0.21
CHEK1-210ENST00000528276 PRMT9Q6P2P2 845 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 HACD2Q6Y1H2 254 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 TMPRSS11BQ86T26 416 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 KLHDC8AQ8IYD2 350 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 DENND6BQ8NEG7 585 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 OR5AR1Q8NGP9 310 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 SH3KBP1Q96B97 665 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 UHRF1Q96T88 793 aaPredicted RBP13.77□□□□□ -0.21
CHEK1-210ENST00000528276 HOPXQ9BPY8 73 aaPredicted RBP13.77□□□□□ -0.21
CHEK1-210ENST00000528276 TIMM29Q9BSF4 260 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 CD248Q9HCU0 757 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 POMPQ9Y244 141 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 SLC17A4Q9Y2C5 497 aa13.77□□□□□ -0.21
CHEK1-210ENST00000528276 PDZK1P1A8MUH7 402 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 PSMG1O95456 288 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 CEACAM5P06731 702 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 FOSL2P15408 326 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 GABRG2P18507 467 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 IDSP22304 550 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 HNRNPA2B1P22626 353 aaKnown RBP13.76□□□□□ -0.21
CHEK1-210ENST00000528276 AKT2P31751 481 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 ACSL1P33121 698 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 DDX39BQ13838 428 aaKnown RBP13.76□□□□□ -0.21
CHEK1-210ENST00000528276 RCAN2Q14206 197 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 RCN1Q15293 331 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 TRIM69Q86WT6 500 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 ZFAND4Q86XD8 727 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 OR5K2Q8NHB8 316 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 JADE3Q92613 823 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 LRCH3Q96II8 777 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 FERD3LQ96RJ6 166 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 ACPTQ9BZG2 426 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 DPY30Q9C005 99 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 IL1RL2Q9HB29 575 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 LEF1Q9UJU2 399 aaPredicted RBP13.76□□□□□ -0.21
CHEK1-210ENST00000528276 SUFUQ9UMX1 484 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 MRPS17Q9Y2R5 130 aaKnown RBP13.76□□□□□ -0.21
CHEK1-210ENST00000528276 CCL27Q9Y4X3 112 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 CFAP20Q9Y6A4 193 aaKnown RBP13.76□□□□□ -0.21
CHEK1-210ENST00000528276 KCNE1BA0A087WTH5 132 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 E7ENX8 843 aa13.76□□□□□ -0.21
CHEK1-210ENST00000528276 SOX1O00570 391 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms