RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ZNF641Q96N77 438 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-208ENST00000527323 RASSF1Q9NS23 344 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 VPS51Q9UID3 782 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 PCDHGA10Q9Y5H3 936 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 SLC16A6O15403 523 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 MT-ND2P03891 347 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 IL6P05231 212 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 COL6A1P12109 1028 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 TGM1P22735 817 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 MAPKAPK2P49137 400 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 CLK1P49759 484 aaKnown RBP12.21□□□□□ -0.45
CAPN1-208ENST00000527323 FAM189BP81408 668 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 CLCA4Q14CN2 919 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 HIST2H2ACQ16777 129 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-208ENST00000527323 AGAP7PQ5VUJ5 663 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 B3GNT8Q7Z7M8 397 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 KCNJ9Q92806 393 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 PYURFQ96I23 114 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 YIPF2Q9BWQ6 316 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 WWOXQ9NZC7 414 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 TMEFF2Q9UIK5 374 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF490Q9ULM2 529 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-208ENST00000527323 PKP3Q9Y446 797 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 VWA8A3KMH1 1905 aa12.21□□□□□ -0.45
CAPN1-208ENST00000527323 DIRAS1O95057 198 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 OXSR1O95747 527 aaPredicted RBP12.21□□□□□ -0.46
CAPN1-208ENST00000527323 PABPC1P11940 636 aaKnown RBP12.21□□□□□ -0.46
CAPN1-208ENST00000527323 GJA1P17302 382 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 TYMPP19971 482 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 MAD2L1Q13257 205 aaPredicted RBP12.21□□□□□ -0.46
CAPN1-208ENST00000527323 IL18R1Q13478 541 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 KIAA0040Q15053 153 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 PCBP2Q15366 365 aaKnown RBP eCLIP12.21□□□□□ -0.462e-6■■■□□ 14.7
CAPN1-208ENST00000527323 KCNJ8Q15842 424 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 SMN1Q16637 294 aaKnown RBP12.21□□□□□ -0.46
CAPN1-208ENST00000527323 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 GPR149Q86SP6 731 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 ADAMTSL2Q86TH1 951 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 CYP4Z1Q86W10 505 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 MSRB3Q8IXL7 192 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 MFSD4AQ8N468 514 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 MCFD2Q8NI22 146 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 RPL3LQ92901 407 aaKnown RBP12.21□□□□□ -0.46
CAPN1-208ENST00000527323 LGALS12Q96DT0 336 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 ZHX1-C8orf76Q96EF9 292 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 BARD1Q99728 777 aaKnown RBP12.21□□□□□ -0.46
CAPN1-208ENST00000527323 LRTM1Q9HBL6 345 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 C1orf109Q9NX04 203 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 FBXO10Q9UK96 956 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 NEUROG3Q9Y4Z2 214 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 RAI2Q9Y5P3 530 aa12.21□□□□□ -0.46
CAPN1-208ENST00000527323 CBX4O00257 560 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 PER2O15055 1255 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 RGS10O43665 173 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 ARHGEF15O94989 841 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 TGFBR1P36897 503 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 KCNQ1P51787 676 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 SLC13A2Q13183 592 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 ZNF697Q5TEC3 545 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 MYOCQ99972 504 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 MGME1Q9BQP7 344 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 RHNO1Q9BSD3 238 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 TMED5Q9Y3A6 229 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 ESR1P03372 595 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 RETP07949 1114 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 PTGER3P43115 390 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 SEPHS1P49903 392 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 NFE2Q16621 373 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-208ENST00000527323 SLC7A5P1Q8MH63 180 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 SVOPQ8N4V2 548 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 APOL4Q9BPW4 351 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 PSD2Q9BQI7 771 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 KAT8Q9H7Z6 458 aaKnown RBP12.2□□□□□ -0.46
CAPN1-208ENST00000527323 TLR8Q9NR97 1041 aaKnown RBP12.2□□□□□ -0.46
CAPN1-208ENST00000527323 SLC6A13Q9NSD5 602 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
CAPN1-208ENST00000527323 KIF17Q9P2E2 1029 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 OPTCQ9UBM4 332 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 AGO1Q9UL18 857 aaKnown RBP12.2□□□□□ -0.46
CAPN1-208ENST00000527323 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 NAALAD2Q9Y3Q0 740 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 PCDHB5Q9Y5E4 795 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 PMF1-BGLAPU3KQ54 211 aa12.2□□□□□ -0.46
CAPN1-208ENST00000527323 VPS13AQ96RL7 3174 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 SLC28A1O00337 649 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 PRLP01236 227 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CD36P16671 472 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 MAGP20916 626 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 S100A3P33764 101 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 WDR5P61964 334 aaKnown RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 TWF1Q12792 350 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 TRAF3Q13114 568 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 NADSYN1Q6IA69 706 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 RGL4Q8IZJ4 473 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 TTC29Q8NA56 475 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 ATG16L2Q8NAA4 619 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 GLB1L3Q8NCI6 653 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 DYNC2LI1Q8TCX1 351 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 PSKH2Q96QS6 385 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms