RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CCM2LQ9NUG4 571 aaPredicted RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 SPATA6Q9NWH7 488 aaPredicted RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 SIRT5Q9NXA8 310 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PACSIN3Q9UKS6 424 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 AP4S1Q9Y587 144 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PCDHGA11Q9Y5H2 935 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 KCNE2Q9Y6J6 123 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 MYO9BQ13459 2157 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 CLGNO14967 610 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 INPP4BO15327 924 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 MMP20O60882 483 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 ERN1O75460 977 aaKnown RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 KCNH1O95259 989 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 RPSAP08865 295 aaKnown RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 FCGR1AP12314 374 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 BCKDHAP12694 445 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 ACADLP28330 430 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 HSD17B2P37059 387 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 GSK3BP49841 420 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 RPS14P62263 151 aaKnown RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 IRF8Q02556 426 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 COL19A1Q14993 1142 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 ARHGAP19Q14CB8 494 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 CPSF6Q16630 551 aaKnown RBP eCLIP11.62□□□□□ -0.55
PKP4-213ENST00000486254 ZNF776Q68DI1 518 aaPredicted RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 NANOGP8Q6NSW7 305 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 XKR5Q6UX68 686 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 C11orf96Q7Z7L8 435 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PROSER1Q86XN7 944 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 TRAPPC5Q8IUR0 188 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 ZNF547Q8IVP9 402 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PHC3Q8NDX5 983 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 TNIP2Q8NFZ5 429 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 OR52E4Q8NGH9 312 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 C11orf24Q96F05 449 aaPredicted RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 LRCH3Q96II8 777 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 NECTIN4Q96NY8 510 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 GABRG3Q99928 467 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 OR2AG1Q9H205 316 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 NANOGQ9H9S0 305 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 FARSBQ9NSD9 589 aaKnown RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 ATXN10Q9UBB4 475 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 MAGEL2Q9UJ55 1249 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 SCML1Q9UN30 329 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PCDHB3Q9Y5E6 796 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 LAMA2P24043 3122 aaKnown RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 TRBV5-3A0A0A0MS03 114 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 K7ESM1 405 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 ARPC2O15144 300 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 LINC01565O15544 149 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 PRAMEF4O60810 478 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 KCNJ13O60928 360 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 SLC16A8O95907 504 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 RPN2P04844 631 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 PGRP06401 933 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 ERGP11308 486 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 UQCRBP14927 111 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 TCN1P20061 433 aaPredicted RBP11.61□□□□□ -0.55
PKP4-213ENST00000486254 GDI1P31150 447 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 KIR2DL1P43626 348 aaPredicted RBP11.61□□□□□ -0.55
PKP4-213ENST00000486254 PREPP48147 710 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 HMGCS1Q01581 520 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 DMPKQ09013 629 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 MTAPQ13126 283 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 MAP7Q14244 749 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 GRM2Q14416 872 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 LRIF1Q5T3J3 769 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 ZNF648Q5T619 568 aaPredicted RBP11.61□□□□□ -0.55
PKP4-213ENST00000486254 PRAMEF9Q5VWM5 478 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 ANO7Q6IWH7 933 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 CAPN13Q6MZZ7 669 aaPredicted RBP11.61□□□□□ -0.55
PKP4-213ENST00000486254 PNCKQ6P2M8 343 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 PDZD3Q86UT5 571 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 SFTPA1Q8IWL2 248 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 LILRA2Q8N149 483 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 LIX1Q8N485 282 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 ZNF513Q8N8E2 541 aaPredicted RBP11.61□□□□□ -0.55
PKP4-213ENST00000486254 FAM156AQ8NDB6 213 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 PAPD5Q8NDF8 572 aaKnown RBP11.61□□□□□ -0.55
PKP4-213ENST00000486254 OR9A1PQ8NGU1 263 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 GTF2H4Q92759 462 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 HBEGFQ99075 208 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 PKP4Q99569 1192 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 EFCAB11Q9BUY7 163 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 TEX101Q9BY14 249 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 PCDHAC1Q9H158 963 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 OR52A5Q9H2C5 316 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 Q9H521 79 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 IGFLR1Q9H665 355 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 INTS7Q9NVH2 962 aaKnown RBP11.61□□□□□ -0.55
PKP4-213ENST00000486254 CLEC1BQ9P126 229 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 RAB26Q9ULW5 256 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 COQ6Q9Y2Z9 468 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 DTNAQ9Y4J8 743 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 NEUROG3Q9Y4Z2 214 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 GMEB1Q9Y692 573 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 COL4A2P08572 1712 aa11.61□□□□□ -0.55
PKP4-213ENST00000486254 NUMA1Q14980 2115 aa11.6□□□□□ -0.55
PKP4-213ENST00000486254 ANHXE9PGG2 379 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms