RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SBK3P0C264 359 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 CDK4P11802 303 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 CCL4P13236 92 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 ST6GAL1P15907 406 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 H2AFXP16104 143 aaPredicted RBP15.33■□□□□ 0.04
COPS3-207ENST00000477299 ATP6V0D1P61421 351 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 NAE1Q13564 534 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 KCNAB1Q14722 419 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 ZIC1Q15915 447 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 TAF1BQ53T94 588 aaPredicted RBP15.33■□□□□ 0.04
COPS3-207ENST00000477299 KIAA1614Q5VZ46 1190 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 ANKS6Q68DC2 871 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 ARMC6Q6NXE6 501 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 CDHR3Q6ZTQ4 885 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 PLXDC1Q8IUK5 500 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 SYTL1Q8IYJ3 562 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 TMEM151AQ8N4L1 468 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 OR2A1Q8NGT9 310 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 WDR48Q8TAF3 677 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 MAGEC3Q8TD91 643 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 ANKRD7Q92527 254 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 MTBPQ96DY7 904 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 DEPDC7Q96QD5 511 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 TMEM109Q9BVC6 243 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 EPB41L1Q9H4G0 881 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 NMRAL1Q9HBL8 299 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 TMEM216Q9P0N5 145 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 SPATA7Q9P0W8 599 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 LNPEPQ9UIQ6 1025 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 NOVA2Q9UNW9 492 aaKnown RBP15.33■□□□□ 0.04
COPS3-207ENST00000477299 OARD1Q9Y530 152 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 ASB1Q9Y576 335 aa15.33■□□□□ 0.04
COPS3-207ENST00000477299 FAM221BA6H8Z2 402 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 C2orf74A8MZ97 194 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 ZW10O43264 779 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 CDH16O75309 829 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 RASSF9O75901 435 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 MT-ND3P03897 115 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 MTHFD2P13995 350 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 KRT15P19012 456 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 SLC26A3P40879 764 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 ETV5P41161 510 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 GDF5P43026 501 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 SH3BP2P78314 561 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 PRKAA1Q13131 559 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 CAMK2BQ13554 666 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 TGFBIQ15582 683 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 KRT71Q3SY84 523 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 KLHL35Q6PF15 583 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 FOXR1Q6PIV2 292 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 SPESP1Q6UW49 350 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 ADAMTSL2Q86TH1 951 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 GPSM1Q86YR5 675 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 C4orf33Q8N1A6 199 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 HMGCLL1Q8TB92 370 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 PMEPA1Q969W9 287 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 ZDHHC12Q96GR4 267 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 MIPEPQ99797 713 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 ROPN1BQ9BZX4 212 aaPredicted RBP15.32■□□□□ 0.04
COPS3-207ENST00000477299 ROPN1Q9HAT0 212 aaPredicted RBP15.32■□□□□ 0.04
COPS3-207ENST00000477299 INTS7Q9NVH2 962 aaKnown RBP15.32■□□□□ 0.04
COPS3-207ENST00000477299 LGALS13Q9UHV8 139 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 RNF112Q9ULX5 631 aa15.32■□□□□ 0.04
COPS3-207ENST00000477299 LRRC14BA6NHZ5 514 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 CTSBP07858 339 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 ENO2P09104 434 aaPredicted RBP15.31■□□□□ 0.04
COPS3-207ENST00000477299 HIST1H2AGP0C0S8 130 aaPredicted RBP15.31■□□□□ 0.04
COPS3-207ENST00000477299 ITIH1P19827 911 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 HIST1H2ADP20671 130 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 CDH3P22223 829 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 OAS2P29728 719 aaKnown RBP15.31■□□□□ 0.04
COPS3-207ENST00000477299 CCKBRP32239 447 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 GRIA3P42263 894 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 TBPL1P62380 186 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 FOXK2Q01167 660 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 CASP8Q14790 479 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 RASA2Q15283 850 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 SF1Q15637 639 aaKnown RBP15.31■□□□□ 0.04
COPS3-207ENST00000477299 FAM83EQ2M2I3 478 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 TECRLQ5HYJ1 363 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 CEP85LQ5SZL2 805 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 FRA10AC1Q70Z53 315 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 TRABD2AQ86V40 505 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 SMPDL3AQ92484 453 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 RHBDF1Q96CC6 855 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 FBXL8Q96CD0 374 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 MED8Q96G25 268 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 PRR11Q96HE9 360 aaPredicted RBP15.31■□□□□ 0.04
COPS3-207ENST00000477299 SCYL1Q96KG9 808 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 HIST1H2AHQ96KK5 128 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 TMEM74Q96NL1 305 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 TRAPPC9Q96Q05 1148 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 OR4K3Q96R72 315 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 HIST1H2AJQ99878 128 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 EGFL8Q99944 293 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 TMEM79Q9BSE2 394 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 H2AFJQ9BTM1 129 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 FAM60AQ9NP50 221 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 SEMA5BQ9P283 1151 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 CPSF2Q9P2I0 782 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms