RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 IQCF5A8MTL0 148 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 ISM1B1AKI9 464 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 C9J4A7 227 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 H3BMH7 237 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 H3BMM5 538 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 EBAG9O00559 213 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 OR2B3O76000 313 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 CAPN1P07384 714 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 MLNP12872 115 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 PAMP19021 973 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 NR1D1P20393 614 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 MGAT1P26572 445 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 NMBRP28336 390 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 ECHS1P30084 290 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 GABRA4P48169 554 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 CSE1LP55060 971 aaKnown RBP13.01□□□□□ -0.33
HMGN1-211ENST00000471260 CORO7P57737 925 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 RPS18P62269 152 aaKnown RBP13.01□□□□□ -0.33
HMGN1-211ENST00000471260 CRADDP78560 199 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 KCNJ11Q14654 390 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 ZIC1Q15915 447 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 RHBDD2Q6NTF9 364 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 TLDC1Q6P9B6 456 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 OTOAQ7RTW8 1153 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 LDB1Q86U70 411 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-211ENST00000471260 VRK3Q8IV63 474 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 RAB42Q8N4Z0 105 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 ENDOVQ8N8Q3 282 aaKnown RBP13.01□□□□□ -0.33
HMGN1-211ENST00000471260 PROKR1Q8TCW9 393 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 MAGEC3Q8TD91 643 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 ADAMTS17Q8TE56 1095 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 RAD51AP1Q96B01 352 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 MFSD3Q96ES6 412 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 FOPNLQ96NB1 174 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 MENTQ9BUN1 341 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 KLHL25Q9H0H3 589 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 FAM60AQ9NP50 221 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 INTS7Q9NVH2 962 aaKnown RBP13.01□□□□□ -0.33
HMGN1-211ENST00000471260 TLK1Q9UKI8 766 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 SRPK3Q9UPE1 567 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 TP53TG5Q9Y2B4 290 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 VPS9D1Q9Y2B5 631 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 PCDHGB7Q9Y5F8 929 aa13.01□□□□□ -0.33
HMGN1-211ENST00000471260 PCDHGA9Q9Y5G4 932 aaKnown RBP13.01□□□□□ -0.33
HMGN1-211ENST00000471260 RASGRF2O14827 1237 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 VAPBO95292 243 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 ESR1P03372 595 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 MYZAPP0CAP1 466 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 OGNP20774 298 aaKnown RBP13□□□□□ -0.33
HMGN1-211ENST00000471260 ARNTP27540 789 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 CCNFP41002 786 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 GNGT1P63211 74 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 GPS1Q13098 491 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 IL10RAQ13651 578 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 NCF4Q15080 339 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 TYSND1Q2T9J0 566 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 ZNF385CQ66K41 422 aaPredicted RBP13□□□□□ -0.33
HMGN1-211ENST00000471260 KIAA0930Q6ICG6 404 aaPredicted RBP13□□□□□ -0.33
HMGN1-211ENST00000471260 LCN10Q6JVE6 187 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 FAM198BQ6UWH4 519 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 MED25Q71SY5 747 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 DNAJC22Q8N4W6 341 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 TMEM102Q8N9M5 508 aaPredicted RBP13□□□□□ -0.33
HMGN1-211ENST00000471260 TEX19Q8NA77 164 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 OR2L8Q8NGY9 312 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 LKAAEAR1Q8TD35 194 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 IFT81Q8WYA0 676 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 MAGOHBQ96A72 148 aaKnown RBP13□□□□□ -0.33
HMGN1-211ENST00000471260 IP6K3Q96PC2 410 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 TRIM4Q9C037 500 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 ING2Q9H160 280 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 EPN3Q9H201 632 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 TMBIM4Q9HC24 238 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 ACSS2Q9NR19 701 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 SYBUQ9NX95 663 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 SLC39A10Q9ULF5 831 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 PLAGL1Q9UM63 463 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 PLCL2Q9UPR0 1127 aa13□□□□□ -0.33
HMGN1-211ENST00000471260 TCRBV7S3A2A0A539 114 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 ZSCAN9O15535 394 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-211ENST00000471260 PHF2O75151 1096 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 ZIC2O95409 532 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-211ENST00000471260 C1orf105O95561 183 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 KRT14P02533 472 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 ATP5DP30049 168 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 PEBP1P30086 187 aaKnown RBP12.99□□□□□ -0.33
HMGN1-211ENST00000471260 ARSFP54793 590 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 DCDP81605 110 aaKnown RBP12.99□□□□□ -0.33
HMGN1-211ENST00000471260 GRB7Q14451 532 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 SSPNQ14714 243 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 CYP1B1Q16678 543 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 ZC3H12BQ5HYM0 836 aaKnown RBP12.99□□□□□ -0.33
HMGN1-211ENST00000471260 ASB18Q6ZVZ8 466 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 TRIM73Q86UV7 250 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 HPS6Q86YV9 775 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 KLHL7Q8IXQ5 586 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 OTUD6BQ8N6M0 293 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 LINC01555Q8NAE3 123 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 MCUQ8NE86 351 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 CFAP61Q8NHU2 1237 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms