RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CTSBP07858 339 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 ITGAXP20702 1163 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 CCR7P32248 378 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 AGAP7PQ5VUJ5 663 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 FIGLAQ6QHK4 219 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 IGFL2Q6UWQ7 119 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 PPP1R21Q6ZMI0 780 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 MICALCLQ6ZW33 695 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 KIAA1328Q86T90 577 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 CUZD1Q86UP6 607 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 LINC01555Q8NAE3 123 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 ST6GALNAC3Q8NDV1 305 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 OR6P1Q8NGX9 317 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 AGAP4Q96P64 663 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 MENTQ9BUN1 341 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 SEMA3GQ9NS98 782 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 CDC23Q9UJX2 597 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 ANAPC5Q9UJX4 755 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 FBXL4Q9UKA2 621 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 SRPX2O60687 465 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-220ENST00000458038 PRAMEP78395 509 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 TMED2Q15363 201 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 SF1Q15637 639 aaKnown RBP20.65■□□□□ 0.9
CPNE1-220ENST00000458038 NKG7Q16617 165 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 TTC29Q8NA56 475 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-220ENST00000458038 GSDMBQ8TAX9 411 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 INPP5DQ92835 1189 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 ZNF285Q96NJ3 590 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 SLC6A20Q9NP91 592 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 CUTCQ9NTM9 273 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 SLC39A10Q9ULF5 831 aa20.65■□□□□ 0.9
CPNE1-220ENST00000458038 R3HDM2Q9Y2K5 976 aaKnown RBP20.65■□□□□ 0.9
CPNE1-220ENST00000458038 ENO4A6NNW6 628 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 E7EVH7 732 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 RASGRF2O14827 1237 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 KPNA5O15131 536 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 CLDN1O95832 211 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 ATXN8OSP0DMR3 200 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 AOAHP28039 575 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 TTPAP49638 278 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 CSE1LP55060 971 aaKnown RBP20.64■□□□□ 0.89
CPNE1-220ENST00000458038 B3GNTL1Q67FW5 361 aaPredicted RBP20.64■□□□□ 0.89
CPNE1-220ENST00000458038 RAB42Q8N4Z0 105 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 CFAP61Q8NHU2 1237 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 RAD51AP1Q96B01 352 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 SPSB2Q99619 263 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 LHPPQ9H008 270 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 ETNK1Q9HBU6 452 aa20.64■□□□□ 0.89
CPNE1-220ENST00000458038 ZBTB20Q9HC78 741 aaPredicted RBP20.64■□□□□ 0.89
CPNE1-220ENST00000458038 FITM1A5D6W6 292 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 SOCS6O14544 535 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 PRMT5O14744 637 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-220ENST00000458038 DCTP40126 519 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 TSFMP43897 325 aaKnown RBP20.63■□□□□ 0.89
CPNE1-220ENST00000458038 KIF5AQ12840 1032 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 TUBB8Q3ZCM7 444 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 RAD9BQ6WBX8 426 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 VRK3Q8IV63 474 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 FAM20CQ8IXL6 584 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 TAB3Q8N5C8 712 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-220ENST00000458038 LMNTD1Q8N9Z9 388 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 DNAJB14Q8TBM8 379 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 PANX3Q96QZ0 392 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 SELENOSQ9BQE4 189 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 EPS8L2Q9H6S3 715 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 SLC2A6Q9UGQ3 507 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 KLHL20Q9Y2M5 609 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 TCAF1Q9Y4C2 921 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 KLK4Q9Y5K2 254 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 HS3ST3B1Q9Y662 390 aa20.63■□□□□ 0.89
CPNE1-220ENST00000458038 PER3P56645 1201 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 GRB7Q14451 532 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 NAA25Q14CX7 972 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 FCRL6Q6DN72 434 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 KIRREL2Q6UWL6 708 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 ZNF534Q76KX8 674 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 KCNMB4Q86W47 210 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 SLC34A3Q8N130 599 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 ACRBPQ8NEB7 543 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 HMGCLL1Q8TB92 370 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 HES6Q96HZ4 224 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 PACSIN2Q9UNF0 486 aaPredicted RBP20.62■□□□□ 0.89
CPNE1-220ENST00000458038 NOVA2Q9UNW9 492 aaKnown RBP20.62■□□□□ 0.89
CPNE1-220ENST00000458038 NTNG1Q9Y2I2 539 aa20.62■□□□□ 0.89
CPNE1-220ENST00000458038 TCRBV7S2A1N4TA0A589 114 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 VSTM2BA6NLU5 285 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 MASP2O00187 686 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 PRICKLE3O43900 615 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-220ENST00000458038 CCNFP41002 786 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 CARSP49589 748 aaKnown RBP20.61■□□□□ 0.89
CPNE1-220ENST00000458038 FOXL2P58012 376 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 TLR1Q15399 786 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 OASLQ15646 514 aaKnown RBP20.61■□□□□ 0.89
CPNE1-220ENST00000458038 RBBP7Q16576 425 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 ZNF787Q6DD87 383 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 PRMT9Q6P2P2 845 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 COX15Q7KZN9 410 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 LRRC6Q86X45 466 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 MPP5Q8N3R9 675 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 C2orf73Q8N5S3 287 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms