RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 P3H2Q8IVL5 708 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 ZNF781Q8N8C0 355 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 WFDC5Q8TCV5 224 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 BTBD10Q9BSF8 475 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 ATP6V1HQ9UI12 483 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 SAP18O00422 153 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 SLC16A5O15375 505 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 RPL34P49207 117 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 ZNF155Q12901 538 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 GSTA3Q16772 222 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 FAM214AQ32MH5 1076 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 FGD3Q5JSP0 725 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 KDM1BQ8NB78 822 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 TLCD1Q96CP7 247 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 ADNPQ9H2P0 1102 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 A0A0U1RQS6 177 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 CCDC189A1A4V9 331 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 FAM92AA1XBS5 289 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 LATO43561 262 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 ZMPSTE24O75844 475 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 PENKP01210 267 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 ALBP02768 609 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 TMEM31Q5JXX7 168 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 TMEM126BQ8IUX1 230 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 ATG16L2Q8NAA4 619 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 EDAQ92838 391 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 IL37Q9NZH6 218 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 VPS29Q9UBQ0 182 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 CDH22Q9UJ99 828 aa13.74□□□□□ -0.21
SMARCA4-204ENST00000444061 C5orf67F2Z3F1 127 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 DLX3O60479 287 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 PTX3P26022 381 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 IRF4Q15306 451 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 RFTN2Q52LD8 501 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 DPY19L2P1Q6NXN4 242 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 CYP2R1Q6VVX0 501 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 ZDHHC14Q8IZN3 488 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 KIAA1143Q96AT1 154 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 MIEF2Q96C03 454 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 TGM7Q96PF1 710 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 GAL3ST4Q96RP7 486 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 MMP17Q9ULZ9 603 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 LRCH1Q9Y2L9 728 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 KIAA1217Q5T5P2 1943 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 ARHGEF9O43307 516 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 SLC28A2O43868 658 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 PCDH7O60245 1069 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 SERPINB7O75635 380 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 SERPINI2O75830 405 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 UMPSP11172 480 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 TMED10P49755 219 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 PSME3P61289 254 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 UBAP2LQ14157 1087 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 PNCKQ6P2M8 343 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 TIFABQ6ZNK6 161 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 DHDDSQ86SQ9 333 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 AMIGO1Q86WK6 493 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 SLC9A6Q92581 669 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 ARRDC3Q96B67 414 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 FAM192AQ9GZU8 254 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 TEKT2Q9UIF3 430 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 PDE9AO76083 593 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 APOA1P02647 267 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 MAPK10P53779 464 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 RCN1Q15293 331 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 TRMT5Q32P41 509 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 TCHHL1Q5QJ38 904 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 CHMP1BQ7LBR1 199 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 WBP2Q969T9 261 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 BOCQ9BWV1 1114 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 PCDHGA2Q9Y5H1 932 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 LOC285095A0A1B0GVY8 99 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 LOC730098B7Z3J9 87 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 OR6A2O95222 327 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 CER1O95813 267 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 CDH1P12830 882 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 CDK3Q00526 305 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 SEMA3BQ13214 749 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 ALG11Q2TAA5 492 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 PLXDC1Q8IUK5 500 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 LIX1Q8N485 282 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 RNF145Q96MT1 663 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 SH3GL2Q99962 352 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 FOXQ1Q9C009 403 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 PDE7BQ9NP56 450 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 MOCS1Q9NZB8 636 aa13.73□□□□□ -0.21
SMARCA4-204ENST00000444061 H7BY64 318 aa13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 MBTPS2O43462 519 aa13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 UBXN7O94888 489 aa13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 MATN4O95460 622 aa13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 POLR2JP52435 117 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 LRP8Q14114 963 aa13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 VPS26BQ4G0F5 336 aa13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 RNF43Q68DV7 783 aa13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 CPSF7Q8N684 471 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-204ENST00000444061 XAGE5Q8WWM1 108 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms