RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 SPATA7Q9P0W8 599 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 INTS6Q9UL03 887 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 KPNA5O15131 536 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 CAPN15O75808 1086 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SEC14L2O76054 403 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SNX4O95219 450 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 TCF3P15923 654 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ALDH7A1P49419 539 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 RPP38P78345 283 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ALDH6A1Q02252 535 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ACOX1Q15067 660 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 HIST2H2ACQ16777 129 aaPredicted RBP10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 HIST2H2AA3Q6FI13 130 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ELMSAN1Q6PJG2 1045 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 TMPRSS11AQ6ZMR5 421 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SLC22A17Q8WUG5 538 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 POP5Q969H6 163 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 OMA1Q96E52 524 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 NEK6Q9HC98 313 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 GKN1Q9NS71 199 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SNTG1Q9NSN8 517 aa10.86□□□□□ -0.67
CSGALNACT1-202ENST00000397998 A0A1B0GTL3 188 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ILVBLA1L0T0 632 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 FAM25AB3EWG3 89 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 FAM25CB3EWG5 89 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 FAM25GB3EWG6 89 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 MANBAO00462 879 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 OR10H3O60404 316 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 PABPC1P11940 636 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 BCKDHAP12694 445 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 MTHFD2P13995 350 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 HOXB6P17509 224 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 NNMTP40261 264 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SLC15A1P46059 708 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SMARCB1Q12824 385 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 GRSF1Q12849 480 aaKnown RBP eCLIP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 CCL14Q16627 93 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ATAD3BQ5T9A4 648 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ZNF544Q6NX49 715 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ALKAL1Q6UXT8 129 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 MBOAT1Q6ZNC8 495 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 OR2T11Q8NH01 316 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 FCGR1BQ92637 280 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 DUS3LQ96G46 650 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 CRISPLD1Q9H336 500 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ZC4H2Q9NQZ6 224 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 FNIP2Q9P278 1114 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 TRPC4Q9UBN4 977 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 POU2F3Q9UKI9 436 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 PCDHB14Q9Y5E9 798 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ZNFX1Q9P2E3 1918 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ADAM23O75077 832 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 RFPL2O75678 378 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 DNAJB5O75953 348 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 TCEA1P23193 301 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 DSC3Q14574 896 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 RAB41Q5JT25 222 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 C11orf65Q8NCR3 313 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 OR4A15Q8NGL6 344 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 PIH1D2Q8WWB5 315 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SLC38A4Q969I6 547 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 IL4I1Q96RQ9 567 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 YIPF2Q9BWQ6 316 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 TEX12Q9BXU0 123 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 MMP27Q9H306 513 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 B3GNT3Q9Y2A9 372 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 H7C4K7 107 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ACOX3O15254 700 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 EPORP19235 508 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ITIH1P19827 911 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SERPINA4P29622 427 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SMAD3P84022 425 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 TP53BP2Q13625 1128 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 UGT3A2Q3SY77 523 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 HOMEZQ8IX15 550 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 OR10G2Q8NGC3 310 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 C17orf50Q8WW18 174 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 STARD8Q92502 1023 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 C1orf74Q96LT6 269 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 DPH2Q9BQC3 489 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 C2orf49Q9BVC5 232 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 RNF38Q9H0F5 515 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ATP13A3Q9H7F0 1226 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ENOPH1Q9UHY7 261 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 GJD2Q9UKL4 321 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ERVK-11Q9UQG0 969 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 PCDHGB3Q9Y5G1 929 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 SCN1AP35498 2009 aa10.85□□□□□ -0.67
CSGALNACT1-202ENST00000397998 PLK4O00444 970 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ITGB1P05556 798 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 BMP4P12644 408 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 MYL12AP19105 171 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 PSMA1P25786 263 aaKnown RBP10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 GPC1P35052 558 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 CDH4P55283 916 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 TUBA1BP68363 451 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 QPRTQ15274 297 aa10.84□□□□□ -0.67
CSGALNACT1-202ENST00000397998 DHRS4L2Q6PKH6 230 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms