RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 RABL2AQ9UBK7 228 aaPredicted RBP11.8□□□□□ -0.52
CAPRIN1-202ENST00000389645 LHX3Q9UBR4 397 aa11.8□□□□□ -0.52
CAPRIN1-202ENST00000389645 INTS6Q9UL03 887 aaKnown RBP11.8□□□□□ -0.52
CAPRIN1-202ENST00000389645 NOTCH4Q99466 2003 aa11.8□□□□□ -0.52
CAPRIN1-202ENST00000389645 PIKFYVEQ9Y2I7 2098 aa11.8□□□□□ -0.52
CAPRIN1-202ENST00000389645 EMP3P54852 163 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 EMX2Q04743 252 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 CYP4F3Q08477 520 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ABRQ12979 859 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 SIM2Q14190 667 aaPredicted RBP11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 PDCD4Q53EL6 469 aaKnown RBP11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 LRRC66Q68CR7 880 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 SNX20Q7Z614 316 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 PATL1Q86TB9 770 aaKnown RBP11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 PROSER1Q86XN7 944 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 BEND7Q8N7W2 519 aaPredicted RBP11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ISOC1Q96CN7 298 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 AASSQ9UDR5 926 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 OBSL1O75147 1896 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ELOVL7A1L3X0 281 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 K7EPI3 171 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 GFRA2O00451 464 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 RASAL1O95294 804 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 THRBP10828 461 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ARSFP54793 590 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 SF1Q15637 639 aaKnown RBP11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ZNF648Q5T619 568 aaPredicted RBP11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 SCAMP4Q969E2 229 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 MTERF1Q99551 399 aaKnown RBP11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 UGT2B28Q9BY64 529 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 PCDH12Q9NPG4 1184 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 SLC22A14Q9Y267 594 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 SNX5Q9Y5X3 404 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 IRAK3Q9Y616 596 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ADAM23O75077 832 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 SPAM1P38567 509 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 PBX2P40425 430 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 BNIP3Q12983 259 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 DGCR6Q14129 220 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ASTLQ6HA08 431 aaPredicted RBP11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ADGRD2Q7Z7M1 963 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 NRBF2Q96F24 287 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 EGLN2Q96KS0 407 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 RIBC2Q9H4K1 309 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 IKZF5Q9H5V7 419 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 SLCO3A1Q9UIG8 710 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 DGKBQ9Y6T7 804 aa11.79□□□□□ -0.52
CAPRIN1-202ENST00000389645 ANKRD36A6QL64 1941 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 NPIPB15A6NHN6 443 aaPredicted RBP11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 NEDD8-MDP1E9PL57 170 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 CXCR6O00574 342 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 SERPINA1P01009 418 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 TRBC1P01850 177 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 PTPN2P17706 415 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 CDK9P50750 372 aaKnown RBP11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 PWP1Q13610 501 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 ATP6AP1Q15904 470 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 MEP1AQ16819 746 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 INTS11Q5TA45 600 aaKnown RBP11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 ALG1LQ6GMV1 187 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 ANKRD26P1Q6NSI1 321 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 ZCCHC8Q6NZY4 707 aaKnown RBP11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 TMC5Q6UXY8 1006 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 GPR156Q8NFN8 814 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 HM13Q8TCT9 377 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 SNX19Q92543 992 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 SGCDQ92629 289 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 RUBCNLQ9H714 662 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 MAFFQ9ULX9 164 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 CLDN9O95484 217 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 FTH1P02794 183 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 RAP2AP10114 183 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 PORP16435 677 aaPredicted RBP11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 HLA-FP30511 346 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 AP1S1P61966 158 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 FOXM1Q08050 763 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 RAB39AQ14964 217 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 ATP13A5Q4VNC0 1218 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 XKR7Q5GH72 579 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 GPR65Q8IYL9 337 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 C8orf59Q8N0T1 100 aaPredicted RBP11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 ELMO1Q92556 727 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 TPD52L3Q96J77 140 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 CD244Q9BZW8 370 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 TOR3AQ9H497 397 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 HPS4Q9NQG7 708 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 ATAD3AQ9NVI7 634 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 WNT6Q9Y6F9 365 aa11.78□□□□□ -0.52
CAPRIN1-202ENST00000389645 CARNS1A5YM72 827 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 EVPLLA8MZ36 301 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 hCG_2039718K7EN88 272 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 RFXANKO14593 260 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 CDH1P12830 882 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 TCF3P15923 654 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 ZNF182P17025 639 aaPredicted RBP11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 POLR2IP36954 125 aaKnown RBP11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 IRF8Q02556 426 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 TRAF3Q13114 568 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 FGD3Q5JSP0 725 aa11.77□□□□□ -0.52
CAPRIN1-202ENST00000389645 DGKKQ5KSL6 1271 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms