RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TLR4O00206 839 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 TREHO43280 583 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 RFPL2O75678 378 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CYP7B1O75881 506 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PRG2P13727 222 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 EDNRBP24530 442 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CLCN4P51793 760 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 RABGGTBP53611 331 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 TSTQ16762 297 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ANKRD26P1Q6NSI1 321 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 Q6ZNX1 250 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ANKLE1Q8NAG6 615 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 OR8H1Q8NGG4 311 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 OR52J3Q8NH60 311 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 KLHL6Q8WZ60 621 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 POLE3Q9NRF9 147 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PFDN2Q9UHV9 154 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 FZD4Q9ULV1 537 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 KRBA1A5PL33 1030 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ARHGEF33A8MVX0 844 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PGRMC2O15173 223 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 DFNA5O60443 496 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ARHGEF15O94989 841 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CELF2O95319 508 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 FGBP02675 491 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 AZGP1P25311 298 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CORO1AP31146 461 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 TGFBR2P37173 567 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PLA2G16P53816 162 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ATN1P54259 1190 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 MLLT6P55198 1093 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PITPNAQ00169 270 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 KEAP1Q14145 624 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PIK3R6Q5UE93 754 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ARMCX6Q7L4S7 300 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 MAVSQ7Z434 540 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 OR7D4Q8NG98 312 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CNIH3Q8TBE1 160 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CHPT1Q8WUD6 406 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 SEC14L3Q9UDX4 400 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 GIMAP2Q9UG22 337 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 DNAJC15Q9Y5T4 150 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 HTR3EA5X5Y0 456 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CENPBD1B2RD01 187 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 J3KR12 359 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 DLGAP1O14490 977 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 MAFKO60675 156 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 KHDRBS3O75525 346 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PFKMP08237 780 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CD68P34810 354 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 MANFP55145 182 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CREMQ03060 361 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 C2orf80Q0P641 193 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 SERINC3Q13530 473 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 E2F2Q14209 437 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 SPIN4Q56A73 249 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CES5AQ6NT32 575 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PRSS48Q7RTY5 328 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF675Q8TD23 568 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ESAMQ96AP7 390 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF778Q96MU6 729 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 HBEGFQ99075 208 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CD244Q9BZW8 370 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 MRPL17Q9NRX2 175 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 TP73O15350 636 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PRAMEF11O60813 436 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ATG13O75143 517 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PSMA3P25788 255 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 MAGEA12P43365 314 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 MAP2K4P45985 399 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CDKN2DP55273 166 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 SP140Q13342 867 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 C6orf183Q5T699 404 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 METTL25Q8N6Q8 603 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 LRRC20Q8TCA0 184 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 LGALS12Q96DT0 336 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 SH3YL1Q96HL8 342 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 VPS51Q9UID3 782 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 SLC27A5Q9Y2P5 690 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 DHRS7Q9Y394 339 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PRMT3O60678 531 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ITGB1P05556 798 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 ITGAMP11215 1152 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 PSMD4P55036 377 aaKnown RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 OR4D2P58180 307 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 AP3S2P59780 193 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 TIGD5Q53EQ6 642 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 CIR1Q86X95 450 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-202ENST00000377865 GMLQ99445 158 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 DSN1Q9H410 356 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 GTF2IRD1Q9UHL9 959 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 RIMKLBQ9ULI2 386 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 MAP4K5Q9Y4K4 846 aa8.57□□□□□ -1.04
PCDH9-202ENST00000377865 HCRTO43612 131 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 CNTN5O94779 1100 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 ASGR1P07306 291 aa8.56□□□□□ -1.04
PCDH9-202ENST00000377865 SLC2A2P11168 524 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-202ENST00000377865 HOXD12P35452 270 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms