RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 VAMP1P23763 118 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 TSTD2Q5T7W7 516 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 GPR142Q7Z601 462 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 YIPF7Q8N8F6 280 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 THAP6Q8TBB0 222 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 ERVK-11Q9UQG0 969 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 HIF3AQ9Y2N7 669 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 A0A1B0GVT2 93 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 WTIPA6NIX2 430 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 RHPN2P1A8MT19 583 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 ITGA10O75578 1167 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 SLC6A4P31645 630 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 SLC1A2P43004 574 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 GDF10P55107 478 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 NFKB2Q00653 900 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 TEAD4Q15561 434 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 OR10Q1Q8NGQ4 319 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 STON2Q8WXE9 905 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 GATA5Q9BWX5 397 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 SDCBP2Q9H190 292 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 YARS2Q9Y2Z4 477 aaKnown RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 E7EQ34 232 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 ASLP04424 464 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 SLC18A2Q05940 514 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 HEPACAMQ14CZ8 416 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 CYP27C1Q4G0S4 372 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 TPRG1LQ5T0D9 272 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 GATAD2BQ8WXI9 593 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 TESCQ96BS2 214 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 NOP16Q9Y3C1 178 aaKnown RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 DLC1Q96QB1 1528 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 TULP2O00295 520 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 LRCH4O75427 683 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 CCNCP24863 283 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 FCGR1BQ92637 280 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 FTHL17Q9BXU8 183 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 SRMSQ9H3Y6 488 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 MRPS30Q9NP92 439 aaKnown RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 WNT7AO00755 349 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 KHNYNO15037 678 aaKnown RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 C1QTNF8P60827 252 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 GRIK5Q16478 980 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 EIPR1Q53HC9 387 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 ACSBG2Q5FVE4 666 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 C12orf66Q96MD2 445 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 OSBPL7Q9BZF2 842 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 DPAGT1Q9H3H5 408 aa15.72■□□□□ 0.11
COL18A1-203ENST00000359759 ZNF282Q9UDV7 671 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-203ENST00000359759 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 YES1P07947 543 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 PSMG2Q969U7 264 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 DCSTAMPQ9H295 470 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 FAM83DQ9H4H8 585 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 TRAV6A0A075B6T7 132 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 BHMG1C9JSJ3 638 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-203ENST00000359759 H3BSA7 217 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 CDRT1O95170 752 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 RBM20Q5T481 1227 aaKnown RBP15.71■□□□□ 0.11
COL18A1-203ENST00000359759 TM9SF2Q99805 663 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 SLC35A5Q9BS91 424 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 MKKSQ9NPJ1 570 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-203ENST00000359759 ELOVL2Q9NXB9 296 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 OAZ3Q9UMX2 235 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 PCDHGA12O60330 932 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 CCKBRP32239 447 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 CHRNA4P43681 627 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 ADAM15Q13444 863 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 DSG2Q14126 1118 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 TMEM198Q66K66 360 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 SLC25A25Q6KCM7 469 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 TMEM17Q86X19 198 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 IDI2Q9BXS1 227 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 CEMIPQ8WUJ3 1361 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 SPATA31C2B4DYI2 1134 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 TLX3O43711 291 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-203ENST00000359759 NPHS1O60500 1241 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 IFNA21P01568 189 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 FESP07332 822 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 MSL3P1P0C860 447 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 MECP2P51608 486 aaKnown RBP15.71■□□□□ 0.11
COL18A1-203ENST00000359759 PRKD1Q15139 912 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-203ENST00000359759 XKRXQ6PP77 449 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 JAGN1Q8N5M9 183 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 AP1S3Q96PC3 154 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 CERS4Q9HA82 394 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 FZD4Q9ULV1 537 aa15.71■□□□□ 0.11
COL18A1-203ENST00000359759 NDRG2Q9UN36 371 aaKnown RBP15.71■□□□□ 0.11
COL18A1-203ENST00000359759 HYKKA2RU49 373 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 WASH3PC4AMC7 463 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 NUAK1O60285 661 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 STOMP27105 288 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 CLCNKBP51801 687 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 ZNF267Q14586 743 aaPredicted RBP15.71■□□□□ 0.1
COL18A1-203ENST00000359759 LRRC52Q8N7C0 313 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 ACOT12Q8WYK0 555 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 OVCA2Q8WZ82 227 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 PKP4Q99569 1192 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 POLE4Q9NR33 117 aa15.71■□□□□ 0.1
COL18A1-203ENST00000359759 OR51F1A6NGY5 319 aa15.7■□□□□ 0.1
COL18A1-203ENST00000359759 PCDH7O60245 1069 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms