RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TOR1AIP2Q8NFQ8 470 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TCEAL4Q96EI5 215 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 MUS81Q96NY9 551 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 CCDC32Q9BV29 185 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC39A1Q9NY26 324 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 A0A1W2PRQ8 180 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 NT5C1B-RDH14C9J2C7 533 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 C1QTNF3-AMACRE9PGA6 284 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 OR1I1O60431 355 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 CREG1O75629 220 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 NUDT6P53370 316 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 C6orf141Q5SZD1 244 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 ASRGL1Q7L266 308 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TREML1Q86YW5 311 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 CMTR2Q8IYT2 770 aaKnown RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 BCL7BQ9BQE9 202 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 LPIN3Q9BQK8 851 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLA2Q9H6Q3 261 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TNFRSF10DQ9UBN6 386 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 DIP2BQ9P265 1576 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TRAV19A0A0A6YYK7 116 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TLR5O60602 858 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 RBMXL2O75526 392 aaKnown RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 ELK4P28324 431 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 HTR2BP41595 481 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 MAP2K3P46734 347 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 CRISP3P54108 245 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 RELAQ04206 551 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 GANABQ14697 944 aaKnown RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 CAND1Q86VP6 1230 aaKnown RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 GOLM1Q8NBJ4 401 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TFAP2BQ92481 460 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 MIPEPQ99797 713 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 ADAM2Q99965 735 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 KXD1Q9BQD3 176 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 MRPL17Q9NRX2 175 aaKnown RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 CCM2LQ9NUG4 571 aaPredicted RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 RNF19AQ9NV58 838 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 PXDNQ92626 1479 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 MYPNQ86TC9 1320 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 NEMP2A6NFY4 417 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TACSTD2P09758 323 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 HOXD12P35452 270 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 ABHD18Q0P651 414 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 SERPINA13PQ6UXR4 307 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 PYROXD2Q8N2H3 581 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 FCRL5Q96RD9 977 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 UCK2Q9BZX2 261 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 ATG10Q9H0Y0 220 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 CSF2P04141 144 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 TAF1AQ15573 450 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 NDUFA9Q16795 377 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 PIGGQ5H8A4 983 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 KIAA1161Q6NSJ0 714 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 TLDC1Q6P9B6 456 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 SMARCD3Q6STE5 483 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 LRRC69Q6ZNQ3 347 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 NATD1Q8N6N6 113 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 BEND7Q8N7W2 519 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 MAFIPQ8WZ33 124 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 RHBDF1Q96CC6 855 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 TECPR2O15040 1411 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 CARNS1A5YM72 827 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 SNHG28P0DPA3 235 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ENGP17813 658 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 PPP5CP53041 499 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 GRK1Q15835 563 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC7A6OSQ96CW6 309 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZBED6CLQ96FA7 236 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 TAS2R3Q9NYW6 316 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 PPIEQ9UNP9 301 aaKnown RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 SPATA31D1Q6ZQQ2 1576 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 RAB5BP61020 215 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 PTGR1Q14914 329 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 JPH3Q8WXH2 748 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 AJAP1Q9UKB5 411 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 FZD4Q9ULV1 537 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 OR3A3P47888 321 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 OR3A2P47893 321 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 CD97P48960 835 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 OR5J2Q8NH18 312 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF675Q8TD23 568 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 GPR22Q99680 433 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 FAM83DQ9H4H8 585 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 SMURF1Q9HCE7 757 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 EBF1Q9UH73 591 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 SNX10Q9Y5X0 201 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 PTPRJQ12913 1337 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF701M0R085 212 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 H1F0P07305 194 aaKnown RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ELFN1P0C7U0 828 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 HDCP19113 662 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ACVR2AP27037 513 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ARF3P61204 181 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 ARF1P84077 181 aaKnown RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 HSPB3Q12988 150 aa12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 DUS1LQ6P1R4 473 aaKnown RBP12.44□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC2A7Q6PXP3 512 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms