RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 FADS1O60427 444 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 GPR157Q5UAW9 335 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 CLNKQ7Z7G1 428 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 NKAPQ8N5F7 415 aaKnown RBP10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 REPS2Q8NFH8 660 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 BEST4Q8NFU0 473 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 NPLOC4Q8TAT6 608 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 NINJ1Q92982 152 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 FN3KRPQ9HA64 309 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 ACSS2Q9NR19 701 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 SOHLH2Q9NX45 425 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 ELOVL7A1L3X0 281 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 DPY19L4Q7Z388 723 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 Q8N402 240 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 MRPL45Q9BRJ2 306 aaKnown RBP10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 PRMT7Q9NVM4 692 aaPredicted RBP10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 PPP1R14DQ9NXH3 145 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 CD163L1Q9NR16 1453 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 MAGEB4O15481 346 aaPredicted RBP10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 SLC19A2O60779 497 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF286BP0CG31 522 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 CTNNB1P35222 781 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 TAS2R50P59544 299 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 EFEMP1Q12805 493 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 NT5DC1Q5TFE4 455 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 GLRA2P23416 452 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 MRPS10P82664 201 aaKnown RBP10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 PSKH2Q96QS6 385 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 FUNDC2Q9BWH2 189 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 MAP4K5Q9Y4K4 846 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 SPIN1Q9Y657 262 aaPredicted RBP10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 LRRN3E7EW58 273 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 SBK2P0C263 348 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 SPATA19Q7Z5L4 167 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 RBM15BQ8NDT2 890 aaKnown RBP10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 NMUR2Q9GZQ4 415 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 LRRN3Q9H3W5 708 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 DLGAP4Q9Y2H0 992 aa10.96□□□□□ -0.66
HDGFL3-201ENST00000299633 SNAPINO95295 136 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ANKRD23Q86SG2 305 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 GPAT4Q86UL3 456 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ADGRF2Q8IZF7 708 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PGAM4Q8N0Y7 254 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 CGRRF1Q99675 332 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 OR2B3O76000 313 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PRKCZQ05513 592 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 GALEQ14376 348 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 RXFP2Q8WXD0 754 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PAQR5Q9NXK6 330 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 WASF3Q9UPY6 502 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 GJB6O95452 261 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 NLRP8Q86W28 1048 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 C14orf105Q9NVL8 296 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PTPRUQ92729 1446 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 A0A0G2JN53 185 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 CHEK1O14757 476 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 SLC18A2Q05940 514 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 MARC1Q5VT66 337 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 UBQLNLQ8IYU4 475 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 TNS4Q8IZW8 715 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 TNCP24821 2201 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 WASHC1A8K0Z3 465 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 H3BUI4 141 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 HDAC3O15379 428 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ITGA5P08648 1049 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF155Q12901 538 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 WASH2PQ6VEQ5 465 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF75AQ96N20 296 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 RGPD5Q99666 1765 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 DNASE1P24855 282 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 NAPRTQ6XQN6 538 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 DET1Q7L5Y6 550 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF416Q9BWM5 594 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 NOBOXO60393 691 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 GPIP06744 558 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 RHOAP61586 193 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF101Q8IZC7 436 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 NKX2-3Q8TAU0 364 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 SLC6A7Q99884 636 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 RTFDC1Q9BY42 306 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 C12orf65Q9H3J6 166 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 SEPT4O43236 478 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 CYTIPO60759 359 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 TM7SF2O76062 418 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 ENDOD1O94919 500 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 IFNW1P05000 195 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 MYL6P60660 151 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 SLC30A8Q8IWU4 369 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 COPS5Q92905 334 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 MTG2Q9H4K7 406 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 CISHQ9NSE2 258 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 SLITRK5O94991 958 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PKMP14618 531 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PRDX6P30041 224 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 POLR2HP52434 150 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 POLR2JP52435 117 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 CASP9P55211 416 aa10.95□□□□□ -0.66
HDGFL3-201ENST00000299633 PPATQ06203 517 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms