RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 LRRC8AQ8IWT6 810 aa17.27■□□□□ 0.36
PNKP-225ENST00000636214 MAGEC3Q8TD91 643 aa17.27■□□□□ 0.36
PNKP-225ENST00000636214 SPRTNQ9H040 489 aaPredicted RBP17.27■□□□□ 0.36
PNKP-225ENST00000636214 TREX1Q9NSU2 369 aa17.27■□□□□ 0.36
PNKP-225ENST00000636214 MARCH4Q9P2E8 410 aaPredicted RBP17.27■□□□□ 0.36
PNKP-225ENST00000636214 CIDEBQ9UHD4 219 aa17.27■□□□□ 0.36
PNKP-225ENST00000636214 TTC7AQ9ULT0 858 aaPredicted RBP17.27■□□□□ 0.36
PNKP-225ENST00000636214 PCDHGB7Q9Y5F8 929 aa17.27■□□□□ 0.36
PNKP-225ENST00000636214 TNRC6AQ8NDV7 1962 aaKnown RBP17.27■□□□□ 0.36
PNKP-225ENST00000636214 FLNCQ14315 2725 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 TTLL8A6PVC2 850 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 H3BMM5 538 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 PEX12O00623 359 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 RASGRF2O14827 1237 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 SLCO2B1O94956 709 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 VAPBO95292 243 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 IGHEP01854 428 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 CBSLP0DN79 551 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 CD9P21926 228 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 NMBRP28336 390 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 CXCR5P32302 372 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 CBSP35520 551 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 CCNFP41002 786 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 VPS41P49754 854 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 SF1Q15637 639 aaKnown RBP17.26■□□□□ 0.35
PNKP-225ENST00000636214 ZC3H12BQ5HYM0 836 aaKnown RBP17.26■□□□□ 0.35
PNKP-225ENST00000636214 C2orf73Q8N5S3 287 aaPredicted RBP17.26■□□□□ 0.35
PNKP-225ENST00000636214 OR2L8Q8NGY9 312 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 ADAMTS17Q8TE56 1095 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 RAD51AP1Q96B01 352 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 SYBUQ9NX95 663 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 DHCR7Q9UBM7 475 aaKnown RBP17.26■□□□□ 0.35
PNKP-225ENST00000636214 CDYLQ9Y232 598 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 VPS9D1Q9Y2B5 631 aa17.26■□□□□ 0.35
PNKP-225ENST00000636214 PTRH2Q9Y3E5 179 aaKnown RBP17.26■□□□□ 0.35
PNKP-225ENST00000636214 FER1L5A0AVI2 2057 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 ZNF185O15231 689 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 DPM1O60762 260 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 FKBP9O95302 570 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 CAPN1P07384 714 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 TPBGLP0DKB5 382 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 PEBP1P30086 187 aaKnown RBP17.25■□□□□ 0.35
PNKP-225ENST00000636214 ARSFP54793 590 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 GPS1Q13098 491 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 ATP1A4Q13733 1029 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 TRIP13Q15645 432 aaPredicted RBP17.25■□□□□ 0.35
PNKP-225ENST00000636214 FAM69BQ5VUD6 431 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 DNAJC22Q8N4W6 341 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 TTC29Q8NA56 475 aaPredicted RBP17.25■□□□□ 0.35
PNKP-225ENST00000636214 FLVCR1-AS1Q8TAF5 88 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 MFSD3Q96ES6 412 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 FER1L6-AS2Q96M78 137 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 IL17FQ96PD4 163 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 GBP5Q96PP8 586 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 NAP1L3Q99457 506 aaPredicted RBP17.25■□□□□ 0.35
PNKP-225ENST00000636214 KIFC1Q9BW19 673 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 EURLQ9NYK6 297 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 SOX13Q9UN79 622 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 PLAAQ9Y263 795 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 PPP2R2CQ9Y2T4 447 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 ANKRD12Q6UB98 2062 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 CCDC88CQ9P219 2028 aa17.25■□□□□ 0.35
PNKP-225ENST00000636214 A6NL46 340 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 E5RI56 91 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 KLHL41O60662 606 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 PDGFAP04085 211 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 PIM1P11309 404 aaPredicted RBP17.24■□□□□ 0.35
PNKP-225ENST00000636214 ALAS2P22557 587 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 FMO4P31512 558 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 BDKRB1P46663 353 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 GABRA4P48169 554 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 MLLT10P55197 1068 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 SSPNQ14714 243 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 SLC9A5Q14940 896 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 NKAIN1Q4KMZ8 207 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 TCTE1Q5JU00 501 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 ARMC3Q5W041 872 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 ZNF385CQ66K41 422 aaPredicted RBP17.24■□□□□ 0.35
PNKP-225ENST00000636214 CNSTQ6PJW8 725 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 CES3Q6UWW8 571 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 HPS6Q86YV9 775 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 MCATQ8IVS2 390 aaKnown RBP17.24■□□□□ 0.35
PNKP-225ENST00000636214 ZBTB2Q8N680 514 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 LINC01555Q8NAE3 123 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 CLEC1AQ8NC01 280 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 TCF12Q99081 682 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 P2RY12Q9H244 342 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 GPR83Q9NYM4 423 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 KLHL20Q9Y2M5 609 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 FAM169AQ9Y6X4 670 aa17.24■□□□□ 0.35
PNKP-225ENST00000636214 VPS4BO75351 444 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 KRT14P02533 472 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 ESR1P03372 595 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 CHRM3P20309 590 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 NAA25Q14CX7 972 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 CYP2A13Q16696 494 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 KIAA0930Q6ICG6 404 aaPredicted RBP17.23■□□□□ 0.35
PNKP-225ENST00000636214 FIGLAQ6QHK4 219 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 MRGPREQ86SM8 312 aa17.23■□□□□ 0.35
PNKP-225ENST00000636214 FAM20CQ8IXL6 584 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms