RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PCDH11YQ9BZA8 1340 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 LOC102723996A0A087X1L8 192 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 ENTPD3O75355 529 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 KHDRBS3O75525 346 aaKnown RBP3.78□□□□□ -1.8
HDDC2-207ENST00000608532 ALOX12P18054 663 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 MMP12P39900 470 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 LBX1P52954 281 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 CLNS1AP54105 237 aaKnown RBP3.78□□□□□ -1.8
HDDC2-207ENST00000608532 PAX9P55771 341 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 DSCR10P59022 87 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 ZNF415Q09FC8 603 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 LMOD3Q0VAK6 560 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 NTRK2Q16620 822 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 ODF4Q2M2E3 257 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 TCTE1Q5JU00 501 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 SPDYCQ5MJ68 293 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 WLSQ5T9L3 541 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 LRRTM1Q86UE6 522 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 OR13C3Q8NGS6 347 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 FAM222BQ8WU58 562 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 SMAP2Q8WU79 429 aaPredicted RBP3.78□□□□□ -1.8
HDDC2-207ENST00000608532 RAD9AQ99638 391 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 PKP2Q99959 881 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 UPF3AQ9H1J1 476 aaKnown RBP3.78□□□□□ -1.8
HDDC2-207ENST00000608532 GKN1Q9NS71 199 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 TBC1D22BQ9NU19 505 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 SPHK1Q9NYA1 384 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 STK26Q9P289 416 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 GRID1Q9ULK0 1009 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 PCDHGB4Q9UN71 923 aa3.78□□□□□ -1.8
HDDC2-207ENST00000608532 ZNF541Q9H0D2 1346 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 A0A1B0GVY2 172 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 ENO4A6NNW6 628 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 DDHD2O94830 711 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 SMIM18P0DKX4 95 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 OPRL1P41146 370 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 MAZP56270 477 aaKnown RBP3.77□□□□□ -1.81
HDDC2-207ENST00000608532 GSDMDP57764 484 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 GCNT1Q02742 428 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 EPS8Q12929 822 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 TAF10Q12962 218 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 CUL4AQ13619 759 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 HERC3Q15034 1050 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 NECTIN1Q15223 517 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 C15orf59Q2T9L4 293 aaPredicted RBP3.77□□□□□ -1.81
HDDC2-207ENST00000608532 FIP1L1Q6UN15 594 aaKnown RBP3.77□□□□□ -1.81
HDDC2-207ENST00000608532 TMEM207Q6UWW9 146 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 TMPRSS11BQ86T26 416 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 OR52N5Q8NH56 324 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 SSMEM1Q8WWF3 244 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 ZNRF4Q8WWF5 429 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 SYN2Q92777 582 aaPredicted RBP3.77□□□□□ -1.81
HDDC2-207ENST00000608532 SLC22A18Q96BI1 424 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 PTERQ96BW5 349 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 NSUN4Q96CB9 384 aaKnown RBP3.77□□□□□ -1.81
HDDC2-207ENST00000608532 SPDL1Q96EA4 605 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 THOC1Q96FV9 657 aaKnown RBP3.77□□□□□ -1.81
HDDC2-207ENST00000608532 RSRC1Q96IZ7 334 aaKnown RBP3.77□□□□□ -1.81
HDDC2-207ENST00000608532 SFXN2Q96NB2 322 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 OR2B2Q9GZK3 357 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 EQTNQ9NQ60 294 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 SLC35C2Q9NQQ7 365 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 SPHK2Q9NRA0 654 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 FAM207AQ9NSI2 230 aaPredicted RBP3.77□□□□□ -1.81
HDDC2-207ENST00000608532 GIMAP4Q9NUV9 329 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 PANK4Q9NVE7 773 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 STUB1Q9UNE7 303 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 PPP2R2CQ9Y2T4 447 aa3.77□□□□□ -1.81
HDDC2-207ENST00000608532 ANKRD18BA2A2Z9 1011 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 EPHB6O15197 1021 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 SH3BP5O60239 455 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 ZSCAN5DPP0CG00 497 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 DARSP14868 501 aaKnown RBP3.76□□□□□ -1.81
HDDC2-207ENST00000608532 LHCGRP22888 699 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 EIF2DP41214 584 aaKnown RBP3.76□□□□□ -1.81
HDDC2-207ENST00000608532 SNAPC1Q16533 368 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 MEA1Q16626 185 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 CTU2Q2VPK5 515 aaKnown RBP3.76□□□□□ -1.81
HDDC2-207ENST00000608532 SNAI3Q3KNW1 292 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 LCN1P1Q5VSP4 162 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 C11orf63Q6NUN7 778 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 BTN2A1Q7KYR7 527 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 ARHGAP22Q7Z5H3 698 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 CENPTQ96BT3 561 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 DHX58Q96C10 678 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 NXNL1Q96CM4 212 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 SPACA9Q96E40 222 aaPredicted RBP3.76□□□□□ -1.81
HDDC2-207ENST00000608532 ZNF486Q96H40 463 aaPredicted RBP3.76□□□□□ -1.81
HDDC2-207ENST00000608532 NECTIN4Q96NY8 510 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 ZNF300Q96RE9 604 aaPredicted RBP3.76□□□□□ -1.81
HDDC2-207ENST00000608532 USP28Q96RU2 1077 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 SHARPINQ9H0F6 387 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 WNT5BQ9H1J7 359 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 CPVLQ9H3G5 476 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 GOLPH3LQ9H4A5 285 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 Q9N2K0 584 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 RPS10P5Q9NQ39 176 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 OR6C2Q9NZP2 312 aa3.76□□□□□ -1.81
HDDC2-207ENST00000608532 MRPL15Q9P015 296 aaKnown RBP3.76□□□□□ -1.81
HDDC2-207ENST00000608532 GPR34Q9UPC5 381 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms