RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 AEBP2Q6ZN18 517 aaPredicted RBP25.98■■□□□ 1.75
HDDC2-207ENST00000608532 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
HDDC2-207ENST00000608532 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
HDDC2-207ENST00000608532 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
HDDC2-207ENST00000608532 FOXD1Q16676 465 aa20.51■□□□□ 0.87
HDDC2-207ENST00000608532 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
HDDC2-207ENST00000608532 ADRA2BP18089 450 aa19.64■□□□□ 0.73
HDDC2-207ENST00000608532 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
HDDC2-207ENST00000608532 PIAS4Q8N2W9 510 aaPredicted RBP19.35■□□□□ 0.69
HDDC2-207ENST00000608532 MSH5O43196 834 aa18.97■□□□□ 0.63
HDDC2-207ENST00000608532 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
HDDC2-207ENST00000608532 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
HDDC2-207ENST00000608532 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
HDDC2-207ENST00000608532 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
HDDC2-207ENST00000608532 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
HDDC2-207ENST00000608532 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
HDDC2-207ENST00000608532 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
HDDC2-207ENST00000608532 KCNA4P22459 653 aa17.42■□□□□ 0.38
HDDC2-207ENST00000608532 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
HDDC2-207ENST00000608532 RNF216Q9NWF9 866 aaPredicted RBP17.18■□□□□ 0.34
HDDC2-207ENST00000608532 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
HDDC2-207ENST00000608532 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
HDDC2-207ENST00000608532 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
HDDC2-207ENST00000608532 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
HDDC2-207ENST00000608532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.222e-7■■■■□ 20.9
HDDC2-207ENST00000608532 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
HDDC2-207ENST00000608532 RNF39Q9H2S5 420 aa16.22■□□□□ 0.19
HDDC2-207ENST00000608532 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
HDDC2-207ENST00000608532 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
HDDC2-207ENST00000608532 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
HDDC2-207ENST00000608532 ZBTB22O15209 634 aa16■□□□□ 0.15
HDDC2-207ENST00000608532 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
HDDC2-207ENST00000608532 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
HDDC2-207ENST00000608532 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
HDDC2-207ENST00000608532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
HDDC2-207ENST00000608532 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
HDDC2-207ENST00000608532 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
HDDC2-207ENST00000608532 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
HDDC2-207ENST00000608532 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
HDDC2-207ENST00000608532 CAPN15O75808 1086 aa15.71■□□□□ 0.11
HDDC2-207ENST00000608532 APLP2Q06481 763 aa15.71■□□□□ 0.11
HDDC2-207ENST00000608532 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
HDDC2-207ENST00000608532 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
HDDC2-207ENST00000608532 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
HDDC2-207ENST00000608532 ATXN8OSP0DMR3 200 aa15.45■□□□□ 0.06
HDDC2-207ENST00000608532 ABCB7O75027 752 aa15.41■□□□□ 0.06
HDDC2-207ENST00000608532 DSG3P32926 999 aa15.4■□□□□ 0.06
HDDC2-207ENST00000608532 POLA2Q14181 598 aa15.27■□□□□ 0.04
HDDC2-207ENST00000608532 ZBTB12Q9Y330 459 aaPredicted RBP14.97□□□□□ -0.01
HDDC2-207ENST00000608532 FBLN2P98095 1184 aa14.9□□□□□ -0.02
HDDC2-207ENST00000608532 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
HDDC2-207ENST00000608532 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
HDDC2-207ENST00000608532 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
HDDC2-207ENST00000608532 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
HDDC2-207ENST00000608532 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
HDDC2-207ENST00000608532 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
HDDC2-207ENST00000608532 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
HDDC2-207ENST00000608532 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
HDDC2-207ENST00000608532 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
HDDC2-207ENST00000608532 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
HDDC2-207ENST00000608532 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
HDDC2-207ENST00000608532 FKBP8Q14318 412 aa14.34□□□□□ -0.11
HDDC2-207ENST00000608532 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
HDDC2-207ENST00000608532 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
HDDC2-207ENST00000608532 PITPNM1O00562 1244 aa14.19□□□□□ -0.14
HDDC2-207ENST00000608532 SPDYE1Q8NFV5 336 aaPredicted RBP14.19□□□□□ -0.14
HDDC2-207ENST00000608532 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
HDDC2-207ENST00000608532 PROM2Q8N271 834 aa14.07□□□□□ -0.16
HDDC2-207ENST00000608532 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
HDDC2-207ENST00000608532 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
HDDC2-207ENST00000608532 PIP4P2Q8N4L2 257 aa13.94□□□□□ -0.18
HDDC2-207ENST00000608532 FXR2P51116 673 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDDC2-207ENST00000608532 POTEHQ6S545 545 aa13.89□□□□□ -0.19
HDDC2-207ENST00000608532 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
HDDC2-207ENST00000608532 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
HDDC2-207ENST00000608532 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
HDDC2-207ENST00000608532 MIER1Q8N108 512 aa13.75□□□□□ -0.21
HDDC2-207ENST00000608532 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
HDDC2-207ENST00000608532 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
HDDC2-207ENST00000608532 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
HDDC2-207ENST00000608532 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
HDDC2-207ENST00000608532 VASPP50552 380 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-207ENST00000608532 HAX1O00165 279 aa13.59□□□□□ -0.23
HDDC2-207ENST00000608532 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDDC2-207ENST00000608532 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
HDDC2-207ENST00000608532 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
HDDC2-207ENST00000608532 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
HDDC2-207ENST00000608532 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
HDDC2-207ENST00000608532 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
HDDC2-207ENST00000608532 IFNLR1Q8IU57 520 aaPredicted RBP13.44□□□□□ -0.26
HDDC2-207ENST00000608532 EVX2Q03828 476 aa13.42□□□□□ -0.26
HDDC2-207ENST00000608532 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
HDDC2-207ENST00000608532 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
HDDC2-207ENST00000608532 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
HDDC2-207ENST00000608532 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
HDDC2-207ENST00000608532 NUBP1P53384 320 aa13.34□□□□□ -0.27
HDDC2-207ENST00000608532 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
HDDC2-207ENST00000608532 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
HDDC2-207ENST00000608532 SP7Q8TDD2 431 aaPredicted RBP13.28□□□□□ -0.28
HDDC2-207ENST00000608532 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms