RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TSSK1BQ9BXA7 367 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 KRTAP9-9Q9BYP9 154 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 KRTAP9-4Q9BYQ2 154 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 PHACTR1Q9C0D0 580 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 TRIT1Q9H3H1 467 aaKnown RBP10.86□□□□□ -0.67
SMAD4-211ENST00000590499 XKR8Q9H6D3 395 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 SAMD15Q9P1V8 674 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 RNF14Q9UBS8 474 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 ASIC3Q9UHC3 531 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 ASF1AQ9Y294 204 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 BTRCQ9Y297 605 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 RPS6KL1Q9Y6S9 549 aa10.86□□□□□ -0.67
SMAD4-211ENST00000590499 FER1L5A0AVI2 2057 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 SCO2A0A1W2PP80 73 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 UBA6A0AVT1 1052 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 CCDC188H7C350 402 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 TP73O15350 636 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 ZBTB11O95625 1053 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 ESR1P03372 595 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 APOA4P06727 396 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 EBLN1P0CF75 366 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 ZNF28P17035 718 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 PAMP19021 973 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 PRDX3P30048 256 aaKnown RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 SHMT2P34897 504 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 CSE1LP55060 971 aaKnown RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 HSD11B2P80365 405 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 DR1Q01658 176 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 FOXM1Q08050 763 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 HSPA14Q0VDF9 509 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 PRKAA1Q13131 559 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 MAP7Q14244 749 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 GRB7Q14451 532 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 KCNAB1Q14722 419 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 MANEAQ5SRI9 462 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 IZUMO3Q5VZ72 239 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 ZNF470Q6ECI4 717 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 PTRHD1Q6GMV3 140 aaKnown RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 ARMC6Q6NXE6 501 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 FBXO38Q6PIJ6 1188 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 UNC5DQ6UXZ4 953 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 UNC5AQ6ZN44 842 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 CHSY3Q70JA7 882 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 PCGF5Q86SE9 256 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 SDCCAG8Q86SQ7 713 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 KLHL7Q8IXQ5 586 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 CACNA2D3Q8IZS8 1091 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 OTUD6BQ8N6M0 293 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 SIDT2Q8NBJ9 832 aaKnown RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 FLVCR1-AS1Q8TAF5 88 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 TTC9Q92623 222 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 STAMBPL1Q96FJ0 436 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 UBL7Q96S82 380 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 PLAC1Q9HBJ0 212 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 C1GALT1Q9NS00 363 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 INTS10Q9NVR2 710 aaKnown RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 POLG2Q9UHN1 485 aa10.85□□□□□ -0.67
SMAD4-211ENST00000590499 FASNP49327 2511 aaKnown RBP10.85□□□□□ -0.67
SMAD4-211ENST00000590499 SPTA1P02549 2419 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 GSAPA4D1B5 854 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 H3BMM5 538 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 NIPSNAP2O75323 286 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 BANF1O75531 89 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 TIAF1O95411 115 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 F7P08709 466 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-211ENST00000590499 LIFP15018 202 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 PGAM1P18669 254 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 PEBP1P30086 187 aaKnown RBP10.84□□□□□ -0.67
SMAD4-211ENST00000590499 PKLRP30613 574 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 FMO4P31512 558 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 SLC1A2P43004 574 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 RHDQ02161 417 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 ACY1Q03154 408 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 TUBB3Q13509 450 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 MORF4L2Q15014 288 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 TMED2Q15363 201 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 KYNUQ16719 465 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 LONRF1Q17RB8 773 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 PLEKHS1Q5SXH7 462 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 HIBCHQ6NVY1 386 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-211ENST00000590499 OTOAQ7RTW8 1153 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 DCUN1D3Q8IWE4 304 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 DENND6AQ8IWF6 608 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 LMNTD2Q8IXW0 634 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 NLGN4XQ8N0W4 816 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 NLGN4YQ8NFZ3 816 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-211ENST00000590499 FCRL4Q96PJ5 515 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 WDR83Q9BRX9 315 aaKnown RBP10.84□□□□□ -0.67
SMAD4-211ENST00000590499 TRIM51Q9BSJ1 452 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 LATS2Q9NRM7 1088 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 SPHK1Q9NYA1 384 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 ACTR10Q9NZ32 417 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 OR6C2Q9NZP2 312 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 CRYL1Q9Y2S2 319 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 MED16Q9Y2X0 877 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 MAD1L1Q9Y6D9 718 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 FAM169AQ9Y6X4 670 aa10.84□□□□□ -0.67
SMAD4-211ENST00000590499 SLC9B1P1A6NJY1 282 aa10.83□□□□□ -0.68
SMAD4-211ENST00000590499 C2orf74A8MZ97 194 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms