RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 B3GNT8Q7Z7M8 397 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 GABARAPL1Q9H0R8 117 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 NEUROG3Q9Y4Z2 214 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 PCDHGA10Q9Y5H3 936 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 A0A1B0GVM2 712 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ARHGEF15O94989 841 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 MT-ND2P03891 347 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 EIF2S1P05198 315 aaKnown RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 GSNP06396 782 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 MYCLP1P12525 358 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 FPR1P21462 350 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 RPS3P23396 243 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 GGT5P36269 586 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 GDF5P43026 501 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 RHOAP61586 193 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 FKBP1BP68106 108 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ARHGEF7Q14155 803 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 MAPK11Q15759 364 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 HIST2H2ACQ16777 129 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 SYT6Q5T7P8 510 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 RNF219Q5W0B1 726 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 CPZQ66K79 652 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 DENND1CQ8IV53 801 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ZBTB2Q8N680 514 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 C2orf69Q8N8R5 385 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ATG16L2Q8NAA4 619 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 SPATA17Q96L03 361 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 DUSP21Q9H596 190 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 IL17CQ9P0M4 197 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 TMED5Q9Y3A6 229 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 PCDHB9Q9Y5E1 797 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 HTR3EA5X5Y0 456 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 LOC730098B7Z3J9 87 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 RFXANKO14593 260 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 INPPL1O15357 1258 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 STK16O75716 305 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 CLDN9O95484 217 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 EOMESO95936 686 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 BMP4P12644 408 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 PCYT1AP49585 367 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 CLDN8P56748 225 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 SLC35A2P78381 396 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 PLEKHG6Q3KR16 790 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ARMC12Q5T9G4 340 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 FAM151BQ6UXP7 276 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 CALHM3Q86XJ0 350 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 MCFD2Q8NI22 146 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 FBLIM1Q8WUP2 373 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 SELENOMQ8WWX9 145 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 YIPF6Q96EC8 236 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 HEPHQ9BQS7 1158 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 NTMT1Q9BV86 223 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ELOVL6Q9H5J4 265 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ASB8Q9H765 288 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 KRT84Q9NSB2 600 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 FARSBQ9NSD9 589 aaKnown RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 PDP1Q9P0J1 537 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 SCHIP1Q9P0W5 487 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 CRLS1Q9UJA2 301 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ATP11BQ9Y2G3 1177 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 TAPBPO15533 448 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 FKBP9O95302 570 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 PRAMEF1O95521 474 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ALDH2P05091 517 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 FABP3P05413 133 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 CSNK2BP67870 215 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 DSC1Q08554 894 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 LRIF1Q5T3J3 769 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 LYPLAL1Q5VWZ2 237 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 TMEM236Q5W0B7 351 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 CHST9Q7L1S5 443 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 P3H2Q8IVL5 708 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 NELL1Q92832 810 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 MTFMTQ96DP5 389 aaKnown RBP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 SNX6Q9UNH7 406 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 MAN2B2Q9Y2E5 1009 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 SAMHD1Q9Y3Z3 626 aaKnown RBP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 JRKO75564 520 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ANXA5P08758 320 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 SMARCB1Q12824 385 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 CPSF6Q16630 551 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 USP39Q53GS9 565 aaKnown RBP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 CAPN13Q6MZZ7 669 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ERICH5Q6P6B1 374 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 SUSD1Q6UWL2 747 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 CADM3Q8N126 398 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 UBTD2Q8WUN7 234 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 REEP1Q9H902 201 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ELOVL2Q9NXB9 296 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 FAM32AQ9Y421 112 aaKnown RBP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 TRBV5-3A0A0A0MS03 114 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 MTMR11A4FU01 709 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 SAGE2PA6NJ88 616 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 CTPS1P17812 591 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 DNASE1L3Q13609 305 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ZCCHC8Q6NZY4 707 aaKnown RBP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 NCEH1Q6PIU2 408 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 PRSS48Q7RTY5 328 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ANKRD46Q86W74 232 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 MFSD4AQ8N468 514 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms