RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 ACSBG2Q5FVE4 666 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 SYDE1Q6ZW31 735 aaPredicted RBP16.91■□□□□ 0.3
EDC3-215ENST00000569007 RAD51AP1Q96B01 352 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 CLIP3Q96DZ5 547 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 FOPNLQ96NB1 174 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 RUFY1Q96T51 708 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 CHRNA10Q9GZZ6 450 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 ACTR5Q9H9F9 607 aaPredicted RBP16.91■□□□□ 0.3
EDC3-215ENST00000569007 FBXO5Q9UKT4 447 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 KLHL20Q9Y2M5 609 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 PCDHGA6Q9Y5G7 932 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 MRFAP1Q9Y605 127 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 FAM169AQ9Y6X4 670 aa16.91■□□□□ 0.3
EDC3-215ENST00000569007 MEN1O00255 615 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 CCNFP41002 786 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 PAFAH1B1P43034 410 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 CLCN7P51798 805 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 MPP1Q00013 466 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 ERV3-1Q14264 604 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 BBS9Q3SYG4 887 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 ZNF549Q6P9A3 640 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 SPNS2Q8IVW8 549 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 LMNTD2Q8IXW0 634 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 CALML6Q8TD86 181 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 N4BP2L2Q92802 583 aaPredicted RBP16.9■□□□□ 0.3
EDC3-215ENST00000569007 LRFN5Q96NI6 719 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 RUNDC3BQ96NL0 473 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 SLC30A3Q99726 388 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 EBNA1BP2Q99848 306 aaKnown RBP16.9■□□□□ 0.3
EDC3-215ENST00000569007 TRIM51Q9BSJ1 452 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 RAB11FIP5Q9BXF6 653 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 CHST8Q9H2A9 424 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 CCDC68Q9H2F9 335 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 ACTL8Q9H568 366 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 IARS2Q9NSE4 1012 aaKnown RBP16.9■□□□□ 0.3
EDC3-215ENST00000569007 MED16Q9Y2X0 877 aa16.9■□□□□ 0.3
EDC3-215ENST00000569007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
EDC3-215ENST00000569007 SNRNP200O75643 2136 aaKnown RBP16.9■□□□□ 0.3
EDC3-215ENST00000569007 E7EQ34 232 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 CCDC188H7C350 402 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 TTI1O43156 1089 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 ZNF749O43361 778 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 CREG1O75629 220 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 MATN4O95460 622 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 KLK3P07288 261 aaPredicted RBP16.89■□□□□ 0.29
EDC3-215ENST00000569007 FURINP09958 794 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 MAGP20916 626 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 RORAP35398 523 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 CCR10P46092 362 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 GABRA4P48169 554 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 POLE2P56282 527 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 MORF4L2Q15014 288 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 KLHL38Q2WGJ6 581 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 LCN10Q6JVE6 187 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 ZNF517Q6ZMY9 492 aaPredicted RBP16.89■□□□□ 0.29
EDC3-215ENST00000569007 KCNMB4Q86W47 210 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 IGDCC3Q8IVU1 814 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 GPR135Q8IZ08 494 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 DSELQ8IZU8 1212 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 C17orf53Q8N3J3 647 aaPredicted RBP16.89■□□□□ 0.29
EDC3-215ENST00000569007 DNAJC22Q8N4W6 341 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 GIMAP7Q8NHV1 300 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 SLC22A18Q96BI1 424 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 PWWP2AQ96N64 755 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 FAM167BQ9BTA0 163 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 GPR87Q9BY21 358 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 SPRTNQ9H040 489 aaPredicted RBP16.89■□□□□ 0.29
EDC3-215ENST00000569007 PCMTD2Q9NV79 361 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 GEMIN8Q9NWZ8 242 aaKnown RBP16.89■□□□□ 0.29
EDC3-215ENST00000569007 RNF14Q9UBS8 474 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 SEC16AO15027 2179 aa16.89■□□□□ 0.29
EDC3-215ENST00000569007 ARHGEF33A8MVX0 844 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 OR2B3O76000 313 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 HAUS5O94927 633 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 TTC4O95801 387 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 CTSBP07858 339 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 ERVK-10P10266 1014 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 SFTPCP11686 197 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 PTPN4P29074 926 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 RPS18P62269 152 aaKnown RBP16.88■□□□□ 0.29
EDC3-215ENST00000569007 RPS15P62841 145 aaKnown RBP16.88■□□□□ 0.29
EDC3-215ENST00000569007 SF1Q15637 639 aaKnown RBP16.88■□□□□ 0.29
EDC3-215ENST00000569007 PTCHD3Q3KNS1 767 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 TTLL9Q3SXZ7 439 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 SPANXN3Q5MJ09 141 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 PDIK1LQ8N165 341 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 RAB42Q8N4Z0 105 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 MAGEC3Q8TD91 643 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 DENND1AQ8TEH3 1009 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 KCNJ9Q92806 393 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 NAT9Q9BTE0 207 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 TRIM31Q9BZY9 425 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 SLC7A5P2Q9GIP4 190 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.88■□□□□ 0.29
EDC3-215ENST00000569007 KLHL42Q9P2K6 505 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 BSNQ9UPA5 3926 aa16.88■□□□□ 0.29
EDC3-215ENST00000569007 CDC14CA4D256 554 aa16.87■□□□□ 0.29
EDC3-215ENST00000569007 H3BMH7 237 aa16.87■□□□□ 0.29
EDC3-215ENST00000569007 PRICKLE3O43900 615 aaPredicted RBP16.87■□□□□ 0.29
EDC3-215ENST00000569007 ITGA8P53708 1063 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms