RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 PDIK1LQ8N165 341 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 RAB42Q8N4Z0 105 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 SLC38A9Q8NBW4 561 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 CLIP3Q96DZ5 547 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 SNF8Q96H20 258 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 RAB11FIP5Q9BXF6 653 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 KCND3Q9UK17 655 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 PCDHB3Q9Y5E6 796 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 BAHCC1Q9P281 2608 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 SNRNP200O75643 2136 aaKnown RBP29.65■■■□□ 2.34
CMTM4-204ENST00000563952 TERTO14746 1132 aaKnown RBP29.65■■■□□ 2.34
CMTM4-204ENST00000563952 HAUS5O94927 633 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 FAM87AP0C7U9 286 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 CASQ1P31415 396 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 ITGA1P56199 1179 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 GPS2Q13227 327 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 KLHL38Q2WGJ6 581 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 SPANXN3Q5MJ09 141 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 ATP1A1-AS1Q5TC04 95 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 HIBCHQ6NVY1 386 aaPredicted RBP29.65■■■□□ 2.34
CMTM4-204ENST00000563952 EXD3Q8N9H8 876 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 MAGEC3Q8TD91 643 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 MR1Q95460 341 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 SLC22A18Q96BI1 424 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 CFAP36Q96G28 342 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 SLC30A3Q99726 388 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 NAT9Q9BTE0 207 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 CAMSAP3Q9P1Y5 1249 aaPredicted RBP29.65■■■□□ 2.34
CMTM4-204ENST00000563952 KLHL20Q9Y2M5 609 aa29.65■■■□□ 2.34
CMTM4-204ENST00000563952 MATN4O95460 622 aa29.64■■■□□ 2.34
CMTM4-204ENST00000563952 OAS2P29728 719 aaKnown RBP29.64■■■□□ 2.34
CMTM4-204ENST00000563952 TTLL9Q3SXZ7 439 aa29.64■■■□□ 2.34
CMTM4-204ENST00000563952 BORAQ6PGQ7 559 aa29.64■■■□□ 2.34
CMTM4-204ENST00000563952 SPNS2Q8IVW8 549 aa29.64■■■□□ 2.34
CMTM4-204ENST00000563952 MED8Q96G25 268 aa29.64■■■□□ 2.34
CMTM4-204ENST00000563952 CATSPER2Q96P56 530 aa29.64■■■□□ 2.34
CMTM4-204ENST00000563952 SLC7A5P2Q9GIP4 190 aa29.64■■■□□ 2.34
CMTM4-204ENST00000563952 ACTR5Q9H9F9 607 aaPredicted RBP29.64■■■□□ 2.34
CMTM4-204ENST00000563952 CHMP2BQ9UQN3 213 aa29.64■■■□□ 2.34
CMTM4-204ENST00000563952 SPTBP11277 2137 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 EFCAB8A8MWE9 144 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 C21orf140B9A014 251 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 E7EQ34 232 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 SMAPO00193 183 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 SEC31AO94979 1220 aaKnown RBP29.63■■■□□ 2.33
CMTM4-204ENST00000563952 MAGP20916 626 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 ELK3P41970 407 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 MRPS25P82663 173 aaKnown RBP29.63■■■□□ 2.33
CMTM4-204ENST00000563952 C19orf57Q0VDD7 668 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 CUL1Q13616 776 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 GPR135Q8IZ08 494 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 ZNF843Q8N446 348 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 GIMAP7Q8NHV1 300 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 GABPB2Q8TAK5 448 aaPredicted RBP29.63■■■□□ 2.33
CMTM4-204ENST00000563952 KCNJ9Q92806 393 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 RUFY1Q96T51 708 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 MED16Q9Y2X0 877 aa29.63■■■□□ 2.33
CMTM4-204ENST00000563952 ATRXP46100 2492 aa29.62■■■□□ 2.33
CMTM4-204ENST00000563952 HCRTR1O43613 425 aa29.62■■■□□ 2.33
CMTM4-204ENST00000563952 KLK3P07288 261 aaPredicted RBP29.62■■■□□ 2.33
CMTM4-204ENST00000563952 ERV3-1Q14264 604 aa29.62■■■□□ 2.33
CMTM4-204ENST00000563952 SF1Q15637 639 aaKnown RBP29.62■■■□□ 2.33
CMTM4-204ENST00000563952 HIF1AQ16665 826 aa29.62■■■□□ 2.33
CMTM4-204ENST00000563952 SYT10Q6XYQ8 523 aa29.62■■■□□ 2.33
CMTM4-204ENST00000563952 C2CD4AQ8NCU7 369 aaPredicted RBP29.62■■■□□ 2.33
CMTM4-204ENST00000563952 GPR21Q99679 349 aa29.62■■■□□ 2.33
CMTM4-204ENST00000563952 PPANQ9NQ55 473 aaKnown RBP29.62■■■□□ 2.33
CMTM4-204ENST00000563952 ZC3H7BQ9UGR2 993 aaKnown RBP29.62■■■□□ 2.33
CMTM4-204ENST00000563952 PCDHGA6Q9Y5G7 932 aa29.62■■■□□ 2.33
CMTM4-204ENST00000563952 COMMD10Q9Y6G5 202 aa29.62■■■□□ 2.33
CMTM4-204ENST00000563952 MEN1O00255 615 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 ZNF749O43361 778 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 OR2B3O76000 313 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 ARL4CP56559 192 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 ETF1P62495 437 aaKnown RBP29.61■■■□□ 2.33
CMTM4-204ENST00000563952 DEFB109BQ30KR1 87 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 DENND1AQ8TEH3 1009 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 CERS2Q96G23 380 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 LRFN5Q96NI6 719 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 AARSD1Q9BTE6 412 aaKnown RBP29.61■■■□□ 2.33
CMTM4-204ENST00000563952 CHRNA10Q9GZZ6 450 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 SPRTNQ9H040 489 aaPredicted RBP29.61■■■□□ 2.33
CMTM4-204ENST00000563952 CHST8Q9H2A9 424 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 ACTL8Q9H568 366 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 IRAK4Q9NWZ3 460 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 SNX24Q9Y343 169 aa29.61■■■□□ 2.33
CMTM4-204ENST00000563952 ARHGEF33A8MVX0 844 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 VPS26AO75436 327 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 GABRA4P48169 554 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 CARSP49589 748 aaKnown RBP29.6■■■□□ 2.33
CMTM4-204ENST00000563952 RPS15P62841 145 aaKnown RBP29.6■■■□□ 2.33
CMTM4-204ENST00000563952 COL9A2Q14055 689 aaPredicted RBP29.6■■■□□ 2.33
CMTM4-204ENST00000563952 EEF1AKMT2Q5JPI9 291 aaKnown RBP29.6■■■□□ 2.33
CMTM4-204ENST00000563952 DSELQ8IZU8 1212 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 DNAJC22Q8N4W6 341 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 INPP5DQ92835 1189 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 NDNQ99608 321 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 FAM114A2Q9NRY5 505 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 PCMTD2Q9NV79 361 aa29.6■■■□□ 2.33
CMTM4-204ENST00000563952 INTS7Q9NVH2 962 aaKnown RBP29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms