RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 FADS2P1A8MWK0 482 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 PALMO75781 387 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 ZGLP1P0C6A0 271 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 MTTPP55157 894 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 PTSQ03393 145 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 STK4Q13043 487 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 CUL4BQ13620 913 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 PTPRRQ15256 657 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 ERICH6BQ5W0A0 696 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 FAM166AQ6J272 317 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 SEM1Q6ZVN7 128 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 LRRTM4Q86VH4 590 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 CRLF3Q8IUI8 442 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 ZFP62Q8NB50 900 aaPredicted RBP10□□□□□ -0.81
HDGFL3-204ENST00000563790 TSEN2Q8NCE0 465 aaKnown RBP10□□□□□ -0.81
HDGFL3-204ENST00000563790 DENND1AQ8TEH3 1009 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 KAT2AQ92830 837 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 DHX58Q96C10 678 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 PIK3IP1Q96FE7 263 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 TRMT61AQ96FX7 289 aaKnown RBP10□□□□□ -0.81
HDGFL3-204ENST00000563790 SMC6Q96SB8 1091 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 BLZF1Q9H2G9 400 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 JKAMPQ9P055 326 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 NEU3Q9UQ49 428 aa10□□□□□ -0.81
HDGFL3-204ENST00000563790 LOC102723996A0A087X1L8 192 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 PVALEFA0A1B0GWK0 134 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 OVOL3O00110 214 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 DDX3XO00571 662 aaKnown RBP eCLIP9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 CDK2AP1O14519 115 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 DSCR3O14972 297 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 DAB1O75553 588 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 MTHFD1P11586 935 aaKnown RBP9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 PEPDP12955 493 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 HLA-DPA1P20036 260 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 CEACAM8P31997 349 aaPredicted RBP9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 ARSFP54793 590 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 MLF1P58340 268 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 POU4F1Q01851 419 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 PCSK7Q16549 785 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 LRRC66Q68CR7 880 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 KRT39Q6A163 491 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 TMEM270Q6UE05 265 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 ABHD13Q7L211 337 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 ZNF547Q8IVP9 402 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 PRSS58Q8IYP2 241 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 GRAMD1CQ8IYS0 662 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 FBXL13Q8NEE6 735 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 NT5C3BQ969T7 300 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 MRPL24Q96A35 216 aaKnown RBP9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 MIEF2Q96C03 454 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 ART5Q96L15 291 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 PIGQQ9BRB3 760 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 TUBB6Q9BUF5 446 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 LRRC27Q9C0I9 530 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 KIR3DX1Q9H7L2 352 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 MMRN2Q9H8L6 949 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 PDFQ9HBH1 243 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 TMEM51Q9NW97 253 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 RAB20Q9NX57 234 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 NFS1Q9Y697 457 aa9.99□□□□□ -0.81
HDGFL3-204ENST00000563790 IGHV4-30-2A0A087WSY4 118 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 WASH4PA8MWX3 477 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 SOCS5O75159 536 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 CPP00450 1065 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 THBS1P07996 1170 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 GABRA1P14867 456 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 NSUN2Q08J23 767 aaKnown RBP eCLIP9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 HENMT1Q5T8I9 393 aaKnown RBP9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 RWDD4Q6NW29 188 aaKnown RBP9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 TTI2Q6NXR4 508 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 ZNF227Q86WZ6 799 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 C19orf47Q8N9M1 422 aaKnown RBP9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 IQUBQ8NA54 791 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 WDR24Q96S15 920 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 PHACTR1Q9C0D0 580 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 TRIM39Q9HCM9 518 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 IRAK4Q9NWZ3 460 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 IL1RAPL1Q9NZN1 696 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 NDRG3Q9UGV2 375 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 INTUQ9ULD6 942 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 PPIL1Q9Y3C6 166 aa9.98□□□□□ -0.81
HDGFL3-204ENST00000563790 RNF225M0QZC1 329 aaPredicted RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ACTN4O43707 911 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 OR10H2O60403 315 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 CALCAP01258 141 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 NR3C1P04150 777 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 VCLP18206 1134 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ZFP36P26651 326 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 MC3RP41968 323 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 OR1D4P47884 311 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 STC1P52823 247 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 YBEYP58557 167 aaPredicted RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 AP1S1P61966 158 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 AMPD3Q01432 767 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 OCA2Q04671 838 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 DEUP1Q05D60 604 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ENPEPQ07075 957 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 AP1B1Q10567 949 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ZIC1Q15915 447 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms