RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 KIAA0513O60268 411 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 PCDHGA12O60330 932 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 RNGTTO60942 597 aaKnown RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 UGT2B17O75795 530 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 DIRAS1O95057 198 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SNX4O95219 450 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 HPRP00739 348 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 IGHA2P01877 340 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 C1QBP02746 253 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 ALAS2P22557 587 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 RYKP34925 604 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 NUDT6P53370 316 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 ATN1P54259 1190 aaPredicted RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 EPHA5P54756 1037 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 PER3P56645 1201 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 RAB10P61026 200 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 CREMQ03060 361 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SIGLEC14Q08ET2 396 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 MXD4Q14582 209 aaPredicted RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 ARHGEF16Q5VV41 709 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 LRFN4Q6PJG9 635 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 DET1Q7L5Y6 550 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SCUBE3Q8IX30 993 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 FNDC5Q8NAU1 212 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 RIT2Q99578 217 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 ELOVL4Q9GZR5 314 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 ANKHQ9HCJ1 492 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 AGO4Q9HCK5 861 aaKnown RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 GALNT9Q9HCQ5 603 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 RAPGEFL1Q9UHV5 662 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 CSADQ9Y600 493 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 RPS10-NUDT3A0A1W2PQS6 291 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 IPO13O94829 963 aaKnown RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 ATP5F1P24539 256 aaPredicted RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 POU1F1P28069 291 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 CXCR3P49682 368 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 CPT1AP50416 773 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 TGFB2P61812 414 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 CHRNB3Q05901 458 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SEMA3BQ13214 749 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 NFE2L1Q14494 772 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 TAF1CQ15572 869 aaPredicted RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 TEX261Q6UWH6 196 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 RTL10Q7L3V2 364 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SH3BP5LQ7L8J4 393 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 PID1Q7Z2X4 250 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 TLK2Q86UE8 772 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 CDC26Q8NHZ8 85 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 KHSRPQ92945 711 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■□□□ 11.6
RTN3-208ENST00000537981 RHBDF1Q96CC6 855 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 TUBGCP3Q96CW5 907 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 CEP19Q96LK0 163 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SIGLEC11Q96RL6 698 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 RBM4BQ9BQ04 359 aaKnown RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 MRPL57Q9BQC6 102 aaKnown RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 NTPCRQ9BSD7 190 aaKnown RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 RBM4Q9BWF3 364 aaKnown RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 TRIM54Q9BYV2 358 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 POLR3FQ9H1D9 316 aaPredicted RBP10.45□□□□□ -0.74
RTN3-208ENST00000537981 IKZF5Q9H5V7 419 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 LRRC4Q9HBW1 653 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 IL1RAPQ9NPH3 570 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 DIABLOQ9NR28 239 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 USE1Q9NZ43 259 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SLC2A6Q9UGQ3 507 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 NEUROG3Q9Y4Z2 214 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 PEX16Q9Y5Y5 336 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 ACTL7AQ9Y615 435 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 U3KQ87 197 aa10.45□□□□□ -0.74
RTN3-208ENST00000537981 SMIM30A4D0T7 59 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 M0R129 80 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PITPNM1O00562 1244 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ANKRD28O15084 1053 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 GPR182O15218 404 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PLA2G10O15496 165 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PAHP00439 452 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PTHP01270 115 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ALPPP05187 535 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ETV6P41212 452 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ERVFC1P60507 584 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 GRIK4Q16099 956 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 TECRLQ5HYJ1 363 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 CCNJQ5T5M9 372 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PIK3R6Q5UE93 754 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 NADSYN1Q6IA69 706 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 C1orf122Q6ZSJ8 110 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 SLC46A3Q7Z3Q1 461 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 LIX1LQ8IVB5 337 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 OR6C4Q8NGE1 309 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 DCLRE1CQ96SD1 692 aaKnown RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 COPS4Q9BT78 406 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 NAT9Q9BTE0 207 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 MLPHQ9BV36 600 aaPredicted RBP10.44□□□□□ -0.74
RTN3-208ENST00000537981 XYLT2Q9H1B5 865 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 RHOJQ9H4E5 214 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 RNF121Q9H920 327 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 FAM8A1Q9UBU6 413 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 PGAP2Q9UHJ9 254 aa10.44□□□□□ -0.74
RTN3-208ENST00000537981 ELF5Q9UKW6 265 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms