RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 KRT71Q3SY84 523 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 CEP85LQ5SZL2 805 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 RNF187Q5TA31 235 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 MRNIPQ6NTE8 343 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 PRSS42Q7Z5A4 293 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 GALNT7Q86SF2 657 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 TDRPQ86YL5 185 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 IGDCC3Q8IVU1 814 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 IQCKQ8N0W5 287 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 AGGF1Q8N302 714 aaeCLIP11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 OTUD6BQ8N6M0 293 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 MFSD3Q96ES6 412 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 SGSM3Q96HU1 749 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 ZIM3Q96PE6 472 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 NRTNQ99748 197 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 MAP3K3Q99759 626 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 ING2Q9H160 280 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 EPB41L4BQ9H329 900 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 SLC40A1Q9NP59 571 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 MLXIPLQ9NP71 852 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 CHRAC1Q9NRG0 131 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 C20orf96Q9NUD7 363 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 MOCS1Q9NZB8 636 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 NFKBIL1Q9UBC1 381 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 ERRFI1Q9UJM3 462 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 ZNF180Q9UJW8 692 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 PSMD13Q9UNM6 376 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 ARL5AQ9Y689 179 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 POLQO75417 2590 aa11.43□□□□□ -0.58
CSNK1E-212ENST00000494610 MDC1Q14676 2089 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 DCHS2Q6V1P9 2916 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 IQANK1A0A1B0GTG1 560 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 ZCWPW2A0A1B0GU75 182 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 OR5K4A6NMS3 321 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 MASP2O00187 686 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 AURKAO14965 403 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 GPR39O43194 453 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 KRT38O76015 456 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 PYGLP06737 847 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 SLC2A4P14672 509 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 ITGALP20701 1170 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 OGNP20774 298 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 NMBRP28336 390 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 PTPN4P29074 926 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 SPAM1P38567 509 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 MSH2P43246 934 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 ARCN1P48444 511 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 CSE1LP55060 971 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 DCDC1P59894 354 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 GPR19Q15760 415 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 UGT8Q16880 541 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 KBTBD12Q3ZCT8 623 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 JMJD6Q6NYC1 403 aaPredicted RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 C11orf96Q7Z7L8 435 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 CNTN4Q8IWV2 1026 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 CTAGE3PQ8IX95 158 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 RBMXL3Q8N7X1 1067 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 FDCSPQ8NFU4 85 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 DNAJC1Q96KC8 554 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 PAFAH2Q99487 392 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 CPNE1Q99829 537 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 NUDT9Q9BW91 350 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 EPB41L1Q9H4G0 881 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 RMI1Q9H9A7 625 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 UCK1Q9HA47 277 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 TRIM39Q9HCM9 518 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 BPIFA1Q9NP55 256 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 SENP1Q9P0U3 644 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 CORO1CQ9ULV4 474 aaPredicted RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 SPO11Q9Y5K1 396 aa11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 CFAP20Q9Y6A4 193 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-212ENST00000494610 PDZD2O15018 2839 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 GOLGA8KD6RF30 607 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 F8W8V4 182 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 CHUKO15111 745 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 RGS16O15492 202 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 VAPBO95292 243 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 GP5P40197 560 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 CLCNKAP51800 687 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 ITGA1P56199 1179 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 ZNF844Q08AG5 666 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 ITGA9Q13797 1035 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 NR6A1Q15406 480 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 LYPLAL1Q5VWZ2 237 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 DUS1LQ6P1R4 473 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 FAM83HQ6ZRV2 1179 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 SDCCAG8Q86SQ7 713 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 TMEM151BQ8IW70 566 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 SRRM1Q8IYB3 904 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 SIDT2Q8NBJ9 832 aaKnown RBP11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 OR4K2Q8NGD2 314 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 OR13J1Q8NGT2 312 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 OR6P1Q8NGX9 317 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 DTX3LQ8TDB6 740 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 MR1Q95460 341 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 GLYATL1Q969I3 302 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 ULK4Q96C45 1275 aa11.41□□□□□ -0.58
CSNK1E-212ENST00000494610 CXorf40BQ96DE9 158 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms